RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CLK2P49760 499 aaKnown RBP18.57■□□□□ 0.56
SNAP47-213ENST00000617596 ANO1Q5XXA6 986 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 CLEC4DQ8WXI8 215 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
SNAP47-213ENST00000617596 ABCB11O95342 1321 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 GOLGA6L22H0YM25 854 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 ZNF174Q15697 407 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 RILPL1Q5EBL4 403 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 TBCKQ8TEA7 893 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 TRERF1Q96PN7 1200 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 RTEL1Q9NZ71 1219 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
SNAP47-213ENST00000617596 MYPNQ86TC9 1320 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 NONOQ15233 471 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 LBX2Q6XYB7 198 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 PAXIP1Q6ZW49 1069 aaPredicted RBP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 KRT25Q7Z3Z0 450 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 POLR3EQ9NVU0 708 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 PCNTO95613 3336 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 FDX1P10109 184 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 OSBPP22059 807 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 MARCKSP29966 332 aaPredicted RBP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 STAT3P40763 770 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 LINC00301Q8NCQ3 95 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 SCAND2PQ9GZW5 306 aaPredicted RBP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 R3HDMLQ9H3Y0 253 aa18.55■□□□□ 0.56
SNAP47-213ENST00000617596 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
SNAP47-213ENST00000617596 COL11A1P12107 1806 aaPredicted RBP18.54■□□□□ 0.56
SNAP47-213ENST00000617596 MCM7P33993 719 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 TRAF1Q13077 416 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 STK38Q15208 465 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 LETM2Q2VYF4 491 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 TTC38Q5R3I4 469 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 GAS2L3Q86XJ1 694 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 ZIC5Q96T25 663 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 TEX13BQ9BXU2 312 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 RNF146Q9NTX7 359 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 PRDM4Q9UKN5 801 aa18.54■□□□□ 0.56
SNAP47-213ENST00000617596 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 FAM155AB1AL88 458 aaPredicted RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 GCOM1H8Y6P7 765 aaPredicted RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 EDIL3O43854 480 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 CNMDO75829 334 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 POLR2MP0CAP2 368 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 NASPP49321 788 aaPredicted RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.562e-6■■■□□ 16.9
SNAP47-213ENST00000617596 PTPAQ15257 358 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 KLHL40Q2TBA0 621 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 Q3C1V9 767 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 ATL3Q6DD88 541 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 ANO3Q9BYT9 981 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 RBPJLQ9UBG7 517 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 SLC10A3P09131 477 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 FSTL1Q12841 308 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 NSMFQ6X4W1 530 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 TMEM87AQ8NBN3 555 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 PURBQ96QR8 312 aaKnown RBP18.53■□□□□ 0.56
SNAP47-213ENST00000617596 COL20A1Q9P218 1284 aa18.53■□□□□ 0.56
SNAP47-213ENST00000617596 ATP2A1O14983 1001 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 OAZ1P54368 228 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 ZNF445P59923 1031 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 UBXN2AP68543 259 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 SLC39A14Q15043 492 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 ANKRD23Q86SG2 305 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.56
SNAP47-213ENST00000617596 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.52■□□□□ 0.56
SNAP47-213ENST00000617596 SPDYE3A6NKU9 549 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 PIK3CDO00329 1044 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 IGF2BP3O00425 579 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNAP47-213ENST00000617596 SPTLC2O15270 562 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 CCNT1O60563 726 aaKnown RBP18.51■□□□□ 0.55
SNAP47-213ENST00000617596 ME1P48163 572 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 CSPP1Q1MSJ5 1256 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 SLC30A10Q6XR72 485 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 NEK8Q86SG6 692 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 SPATC1LQ9H0A9 340 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 RPS6P62753 249 aaKnown RBP18.51■□□□□ 0.55
SNAP47-213ENST00000617596 MB21D1Q8N884 522 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
SNAP47-213ENST00000617596 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
SNAP47-213ENST00000617596 TDP2O95551 362 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 YEATS4O95619 227 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 TRAPPC10P48553 1259 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 HSD17B4P51659 736 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 NCAPG2Q86XI2 1143 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 UIMC1Q96RL1 719 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 MOV10L1Q9BXT6 1211 aaKnown RBP18.5■□□□□ 0.55
SNAP47-213ENST00000617596 PNMA3Q9UL41 463 aa18.5■□□□□ 0.55
SNAP47-213ENST00000617596 GRIN1Q05586 938 aa18.49■□□□□ 0.55
SNAP47-213ENST00000617596 PTGDRQ13258 359 aa18.49■□□□□ 0.55
SNAP47-213ENST00000617596 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
SNAP47-213ENST00000617596 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms