RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 CLIP3Q96DZ5 547 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 DDX11Q96FC9 970 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 HMCESQ96FZ2 354 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 POM121Q96HA1 1249 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 THOC3Q96J01 351 aaKnown RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 JPH4Q96JJ6 628 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 DMRTB1Q96MA1 342 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 COQ10AQ96MF6 247 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 FAM20AQ96MK3 541 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 CDK15Q96Q40 435 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SPSB2Q99619 263 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SDHCQ99643 169 aaPredicted RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 JPH2Q9BR39 696 aaPredicted RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SRSF8Q9BRL6 282 aaKnown RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SLC6A17Q9H1V8 727 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SRA1Q9HD15 236 aaKnown RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 ANLNQ9NQW6 1124 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 TRMT13Q9NUP7 481 aaKnown RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 C19orf73Q9NVV2 129 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 TMEM260Q9NX78 707 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SELENONQ9NZV5 590 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 HDAC6Q9UBN7 1215 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 MBD1Q9UIS9 605 aaPredicted RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 TBC1D30Q9Y2I9 924 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 SLC6A5Q9Y345 797 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF175Q9Y473 711 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 DAAM1Q9Y4D1 1078 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 PLXNB1O43157 2135 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 POLQO75417 2590 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 TNRC18O15417 2968 aaPredicted RBP-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 ANK2Q01484 3957 aa-0.73□□□□□ -2.53
SOX2-OT-236ENST00000616401 WDR81Q562E7 1941 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 TRIP12Q14669 1992 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAP1BP46821 2468 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ALPK2Q86TB3 2170 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 MED13Q9UHV7 2174 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 A0A0B4J293 547 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 GLTPD2A6NH11 291 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PRRT4C9JH25 899 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CCDC188H7C350 402 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 GPR42O15529 346 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CBFA2T2O43439 604 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 LILRA1O75019 489 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 SIN3BO75182 1162 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 RAD17O75943 681 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CDKL5O76039 1030 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ALX3O95076 343 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PAK4O96013 591 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 IGKV1-39P01597 117 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ANGP03950 147 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 F11P03951 625 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 IGKV1D-39P04432 117 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ALPLP05186 524 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CELA2AP08217 269 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 HOXC4P09017 264 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 SP9P0CG40 484 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 POU3F2P20265 443 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 DRD3P35462 400 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CTSOP43234 321 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZFP36L2P47974 494 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 GLIPR1P48060 266 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 LIG3P49916 1009 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ANXA11P50995 505 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 NDPQ00604 133 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 IRF9Q00978 393 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PLCB3Q01970 1234 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CNGB1Q14028 1251 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAPKAPK3Q16644 382 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF260Q3ZCT1 412 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 MSS51Q4VC12 460 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 VWA3BQ502W6 1294 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 TCTE1Q5JU00 501 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 RASIP1Q5U651 963 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 DUSP27Q5VZP5 1158 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 SLC9A4Q6AI14 798 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZC3H14Q6PJT7 736 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 C9orf47Q6ZRZ4 202 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 LINC00336Q6ZUF6 198 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZC3HAV1Q7Z2W4 902 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 HDXQ7Z353 690 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZAR1Q86SH2 424 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PACS2Q86VP3 889 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 P3H2Q8IVL5 708 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZCCHC24Q8N2G6 241 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PGBD5Q8N414 524 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 BOLLQ8N9W6 283 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF784Q8NCA9 323 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 Q8NDZ9 215 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ABHD4Q8TB40 342 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 Q8TCH9 128 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 GATA6Q92908 595 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 EXTL1Q92935 676 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 CLP1Q92989 425 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 RNF31Q96EP0 1072 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 KLHDC7BQ96G42 594 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 SCMH1Q96GD3 660 aa-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZFP91Q96JP5 570 aaPredicted RBP-0.74□□□□□ -2.53
SOX2-OT-236ENST00000616401 PWWP2AQ96N64 755 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms