RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ACRP10323 421 aa24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 FOSL2P15408 326 aa24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 CYP2C18P33260 490 aa24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 AAMPQ13685 434 aa24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 COL25A1Q9BXS0 654 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 RWDD1Q9H446 243 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC3-208ENST00000616074 MFAP1P55081 439 aaKnown RBP24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 PSMC6P62333 389 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 DUSP28Q4G0W2 176 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 RASIP1Q5U651 963 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 CHD1LQ86WJ1 897 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 PLEKHM2Q8IWE5 1019 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 ZKSCAN3Q9BRR0 538 aa24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 RNF41Q9H4P4 317 aaPredicted RBP24.42■■□□□ 1.5
TRAPPC3-208ENST00000616074 UMODL1Q5DID0 1318 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 LOC102724159A0A0B4J2E5 919 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 IGHDP01880 384 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 CALML3P27482 149 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 GRIN2CQ14957 1233 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 PWP2Q15269 919 aaKnown RBP24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 PSRC1Q6PGN9 363 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 RNF207Q6ZRF8 634 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 ZNF365Q70YC5 407 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 ESR2Q92731 530 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 HIPK3Q9H422 1215 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 OSBPL3Q9H4L5 887 aa24.41■■□□□ 1.5
TRAPPC3-208ENST00000616074 WDR19Q8NEZ3 1342 aa24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 SPTBN5Q9NRC6 3674 aaKnown RBP24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 TIFAQ96CG3 184 aa24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 WDR11Q9BZH6 1224 aa24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 TRPV6Q9H1D0 765 aa24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 IL23AQ9NPF7 189 aa24.4■■□□□ 1.5
TRAPPC3-208ENST00000616074 GBF1Q92538 1859 aa24.39■■□□□ 1.5
TRAPPC3-208ENST00000616074 RBM47A0AV96 593 aaKnown RBP24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 GRXCR1A8MXD5 290 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 ZNF213O14771 459 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 B4GALT4O60513 344 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 GOLGA8HP0CJ92 632 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 RPS6P62753 249 aaKnown RBP24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 NUCB1Q02818 461 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 CWC27Q6UX04 472 aaKnown RBP24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 SEZ6LQ9BYH1 1024 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 PBX4Q9BYU1 374 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 PNMA2Q9UL42 364 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 CHD9Q3L8U1 2897 aa24.39■■□□□ 1.49
TRAPPC3-208ENST00000616074 PBX2P40425 430 aa24.38■■□□□ 1.49
TRAPPC3-208ENST00000616074 NOC4LQ9BVI4 516 aaKnown RBP24.38■■□□□ 1.49
TRAPPC3-208ENST00000616074 CPVLQ9H3G5 476 aa24.38■■□□□ 1.49
TRAPPC3-208ENST00000616074 ZNF576Q9H609 170 aa24.38■■□□□ 1.49
TRAPPC3-208ENST00000616074 CCL23P55773 120 aa24.37■■□□□ 1.49
TRAPPC3-208ENST00000616074 GPATCH4Q5T3I0 446 aaKnown RBP24.37■■□□□ 1.49
TRAPPC3-208ENST00000616074 DGKHQ86XP1 1220 aa24.37■■□□□ 1.49
TRAPPC3-208ENST00000616074 UBA5Q9GZZ9 404 aa24.37■■□□□ 1.49
TRAPPC3-208ENST00000616074 DIAPH3Q9NSV4 1193 aa24.37■■□□□ 1.49
TRAPPC3-208ENST00000616074 KDM4AO75164 1064 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 EDNRBP24530 442 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 PDE4DQ08499 809 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 USH1GQ495M9 461 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 OR6J1Q8NGC5 347 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 EXOC6Q8TAG9 804 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 HERVK_113Q902F9 699 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 WNT8AQ9H1J5 351 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 ALDH8A1Q9H2A2 487 aaPredicted RBP24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 POLR3EQ9NVU0 708 aa24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 CXXC1Q9P0U4 656 aaPredicted RBP24.36■■□□□ 1.49
TRAPPC3-208ENST00000616074 MYH6P13533 1939 aa24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 SCN10AQ9Y5Y9 1956 aa24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 CPT1AP50416 773 aa24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 PURAQ00577 322 aaKnown RBP24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 PNMA1Q8ND90 353 aa24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 DNERQ8NFT8 737 aa24.35■■□□□ 1.49
TRAPPC3-208ENST00000616074 B4E1Z4 1266 aa24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 FGBP02675 491 aa24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 MYL3P08590 195 aa24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 PPP2R5BQ15173 497 aa24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 IQCA1Q86XH1 822 aa24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 MPHOSPH6Q99547 160 aaKnown RBP24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 TRMT13Q9NUP7 481 aaKnown RBP24.34■■□□□ 1.49
TRAPPC3-208ENST00000616074 NT5C2P49902 561 aa24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 CDC37Q16543 378 aaPredicted RBP24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 CCDC178Q5BJE1 867 aa24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 OTOP2Q7RTS6 562 aa24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 COPS5Q92905 334 aa24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 KAT14Q9H8E8 782 aa24.33■■□□□ 1.49
TRAPPC3-208ENST00000616074 HIP1O00291 1037 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 NKRFO15226 690 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 RGS22Q8NE09 1264 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 SCFD2Q8WU76 684 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 ANKS1AQ92625 1134 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 SCLYQ96I15 445 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 ZSCAN10Q96SZ4 725 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 MTG1Q9BT17 334 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 DSCC1Q9BVC3 393 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 MTIF3Q9H2K0 278 aaKnown RBP24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 TNKSO95271 1327 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 SCN5AQ14524 2016 aa24.32■■□□□ 1.48
TRAPPC3-208ENST00000616074 CYP2C9P11712 490 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 ADGRF4Q8IZF3 695 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 ENAHQ8N8S7 591 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms