RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 SNED1Q8TER0 1413 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
ATF3-211ENST00000613954 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
ATF3-211ENST00000613954 PTGDRQ13258 359 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 CCDC70Q6NSX1 233 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 PDXDC2PQ6P474 469 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 TTLL6Q8N841 843 aa12.53□□□□□ -0.4
ATF3-211ENST00000613954 ANO9A1A5B4 782 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 FAM205CA6NFA0 338 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 ECE2O60344 883 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 CYLC1P35663 651 aaPredicted RBP12.52□□□□□ -0.4
ATF3-211ENST00000613954 ZNF174Q15697 407 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.4
ATF3-211ENST00000613954 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.4
ATF3-211ENST00000613954 COG1Q8WTW3 980 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 PPM1EQ8WY54 764 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 RUBCNQ92622 972 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 TNFRSF25Q93038 417 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 CDK5RAP2Q96SN8 1893 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 CAPN11Q9UMQ6 739 aa12.52□□□□□ -0.4
ATF3-211ENST00000613954 DDX60LQ5H9U9 1706 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 FLT1P17948 1338 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 F8W031 263 aaPredicted RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 PHACTR2O75167 634 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 DDAH1O94760 285 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 SYF2O95926 243 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 ABL1P00519 1130 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 MYL1P05976 194 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 LONP1P36776 959 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 CORO7P57737 925 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 FUT2Q10981 343 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 STIM1Q13586 685 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 EARS2Q5JPH6 523 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 CCDC122Q5T0U0 273 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 MB21D1Q8N884 522 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 NUP58Q9BVL2 599 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.41
ATF3-211ENST00000613954 REXO2Q9Y3B8 237 aaKnown RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
ATF3-211ENST00000613954 TSPY2A6NKD2 308 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 LGALS16A8MUM7 142 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 EIF3CLB5ME19 914 aaKnown RBP12.51□□□□□ -0.41
ATF3-211ENST00000613954 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
ATF3-211ENST00000613954 C21orf2O43822 256 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 PRPF6O94906 941 aaKnown RBP12.51□□□□□ -0.41
ATF3-211ENST00000613954 CDC25AP30304 524 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 SLC4A8Q2Y0W8 1093 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 TTC31Q49AM3 519 aaPredicted RBP12.51□□□□□ -0.41
ATF3-211ENST00000613954 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 CCDC170Q8IYT3 715 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 TEKT1Q969V4 418 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 EIF3CQ99613 913 aaKnown RBP12.51□□□□□ -0.41
ATF3-211ENST00000613954 CHP1Q99653 195 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 THAP9Q9H5L6 903 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
ATF3-211ENST00000613954 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 DPEP1P16444 411 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 NOP2P46087 812 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 DNM2P50570 870 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 AOC3Q16853 763 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 KIAA1328Q86T90 577 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 DYNLL2Q96FJ2 89 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 MRIQ9BWK5 157 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
ATF3-211ENST00000613954 FOCADQ5VW36 1801 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 KIF13BQ9NQT8 1826 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 KCNA3P22001 575 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 KCNB1Q14721 858 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 MEA1Q16626 185 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 TMTC3Q6ZXV5 915 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 ADSSL1Q8N142 457 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 STAMQ92783 540 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 MMS19Q96T76 1030 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms