RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SMTNP53814 917 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
CDH1-212ENST00000611625 SP4Q02446 784 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 CLUL1Q15846 466 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 PPANQ9NQ55 473 aaKnown RBP13.69□□□□□ -0.22
CDH1-212ENST00000611625 ADGRG1Q9Y653 693 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 LRRC41Q15345 812 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
CDH1-212ENST00000611625 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 ASIC3Q9UHC3 531 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 JRKLQ9Y4A0 524 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
CDH1-212ENST00000611625 DGKHQ86XP1 1220 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 TEKT1Q969V4 418 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 LEMD3Q9Y2U8 911 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 RIPOR2Q9Y4F9 1068 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 BACH1O14867 736 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 EPHB4P54760 987 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 APBA1Q02410 837 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 ZYXQ15942 572 aaKnown RBP13.68□□□□□ -0.22
CDH1-212ENST00000611625 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 PPP1R14CQ8TAE6 165 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
CDH1-212ENST00000611625 KIF20BQ96Q89 1820 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
CDH1-212ENST00000611625 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 CCDC6Q16204 474 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 C6orf163Q5TEZ5 329 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 PIGSQ96S52 555 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 CYP2J2P51589 502 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 ZBTB16Q05516 673 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 XDHP47989 1333 aa13.68□□□□□ -0.22
CDH1-212ENST00000611625 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 BSDC1Q9NW68 430 aaPredicted RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 EXOC7Q9UPT5 735 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 CEP83Q9Y592 693 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 CTIFO43310 598 aaKnown RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 GAS7O60861 476 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 CCT5P48643 541 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 ANTXR2P58335 489 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 KRT12Q99456 494 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 AGLP35573 1532 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 FAM170AA1A519 330 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
CDH1-212ENST00000611625 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 TADA3O75528 432 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 MOCS3O95396 460 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 CXCR5P32302 372 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 KCTD16Q68DU8 428 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 PLCB1Q9NQ66 1216 aa13.67□□□□□ -0.22
CDH1-212ENST00000611625 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 TRIM49BA6NDI0 452 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
CDH1-212ENST00000611625 NR2F2P24468 414 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 HNRNPH2P55795 449 aaKnown RBP13.66□□□□□ -0.22
CDH1-212ENST00000611625 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 TAOK1Q7L7X3 1001 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 WDR24Q96S15 920 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 KIF11P52732 1056 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 GPATCH4Q5T3I0 446 aaKnown RBP13.66□□□□□ -0.22
CDH1-212ENST00000611625 BRINP3Q76B58 766 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 LIG3P49916 1009 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 CYP4A11Q02928 519 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
CDH1-212ENST00000611625 GJA10Q969M2 543 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms