RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 KATNBL1Q9H079 304 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 TNKSO95271 1327 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 BMP3P12645 472 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 MCCP23508 829 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 BEX3Q00994 111 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 CNTN2Q02246 1040 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 STOX1Q6ZVD7 989 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 ZNF365Q70YC5 407 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.89
MUC1-224ENST00000611577 PPM1EQ8WY54 764 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 PRDM12Q9H4Q4 367 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 KAT14Q9H8E8 782 aa20.64■□□□□ 0.89
MUC1-224ENST00000611577 CTAGE5O15320 804 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 CYP2C18P33260 490 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 SLC1A4P43007 532 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 IKQ13123 557 aaPredicted RBP20.63■□□□□ 0.89
MUC1-224ENST00000611577 DGKHQ86XP1 1220 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 TAF6LQ9Y6J9 622 aa20.63■□□□□ 0.89
MUC1-224ENST00000611577 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.62■□□□□ 0.89
MUC1-224ENST00000611577 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 IFIT3O14879 490 aaKnown RBP20.62■□□□□ 0.89
MUC1-224ENST00000611577 TNFAIP2Q03169 654 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 KRT32Q14532 448 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 IFIT1BQ5T764 474 aaKnown RBP20.62■□□□□ 0.89
MUC1-224ENST00000611577 CXCL17Q6UXB2 119 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 CYB5R4Q7L1T6 521 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 FAM133AQ8N9E0 248 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 IL23AQ9NPF7 189 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
MUC1-224ENST00000611577 RNF146Q9NTX7 359 aa20.62■□□□□ 0.89
MUC1-224ENST00000611577 CHD9Q3L8U1 2897 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 ASTN1O14525 1302 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 CD4P01730 458 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 FDX1P10109 184 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 MCM5P33992 734 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 STAT2P52630 851 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 RAB30Q15771 203 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 TLK2Q86UE8 772 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 ENAHQ8N8S7 591 aaPredicted RBP20.61■□□□□ 0.89
MUC1-224ENST00000611577 MSRAQ9UJ68 235 aa20.61■□□□□ 0.89
MUC1-224ENST00000611577 SOWAHBA6NEL2 793 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 ASB14A6NK59 587 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 TNFRSF10AO00220 468 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 EPB41L2O43491 1005 aaKnown RBP20.6■□□□□ 0.89
MUC1-224ENST00000611577 HSPA4P34932 840 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 NOVP48745 357 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 NKX3-2P78367 333 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 CHST3Q7LGC8 479 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 FAM160B2Q86V87 743 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 DCAF4Q8WV16 495 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 HERVK_113Q902F9 699 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 AGBL1Q96MI9 1066 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 MTIF3Q9H2K0 278 aaKnown RBP20.6■□□□□ 0.89
MUC1-224ENST00000611577 HIPK3Q9H422 1215 aa20.6■□□□□ 0.89
MUC1-224ENST00000611577 CABYRO75952 493 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 WTAPQ15007 396 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 FSCN1Q16658 493 aaKnown RBP20.59■□□□□ 0.89
MUC1-224ENST00000611577 TMEM67Q5HYA8 995 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 RCSD1Q6JBY9 416 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 MB21D2Q8IYB1 491 aaPredicted RBP20.59■□□□□ 0.89
MUC1-224ENST00000611577 PNMA1Q8ND90 353 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 GMCL1Q96IK5 515 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 AP5M1Q9H0R1 490 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 CXXC1Q9P0U4 656 aaPredicted RBP20.59■□□□□ 0.89
MUC1-224ENST00000611577 THEGQ9P2T0 379 aa20.59■□□□□ 0.89
MUC1-224ENST00000611577 GNEQ9Y223 722 aaKnown RBP20.59■□□□□ 0.89
MUC1-224ENST00000611577 ZNF536O15090 1300 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 UMODL1Q5DID0 1318 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 PRC1O43663 620 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 ALAS1P13196 640 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 PTGS1P23219 599 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 ITGA7Q13683 1181 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 TKFCQ3LXA3 575 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 KCTD1Q719H9 257 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 SLC43A3Q8NBI5 491 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 TRERF1Q96PN7 1200 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 NKX2-4Q9H2Z4 354 aa20.58■□□□□ 0.89
MUC1-224ENST00000611577 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
MUC1-224ENST00000611577 LRRC37A2A6NM11 1700 aa20.58■□□□□ 0.88
MUC1-224ENST00000611577 DYNC1LI2O43237 492 aaPredicted RBP20.57■□□□□ 0.88
MUC1-224ENST00000611577 ZEB2O60315 1214 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 FGBP02675 491 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 SMPD1P17405 629 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 IGFBP4P22692 258 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 CCL23P55773 120 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 ADGRE1Q14246 886 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 CCDC85BQ15834 202 aaPredicted RBP20.57■□□□□ 0.88
MUC1-224ENST00000611577 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
MUC1-224ENST00000611577 ANKS1AQ92625 1134 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
MUC1-224ENST00000611577 MYO9BQ13459 2157 aa20.56■□□□□ 0.88
MUC1-224ENST00000611577 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms