RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 HDAC1Q13547 482 aaPredicted RBP28.7■■■□□ 2.18
CDKN3-211ENST00000611205 DUSP28Q4G0W2 176 aa28.7■■■□□ 2.18
CDKN3-211ENST00000611205 SEZ6LQ9BYH1 1024 aa28.7■■■□□ 2.18
CDKN3-211ENST00000611205 MTIF3Q9H2K0 278 aaKnown RBP28.7■■■□□ 2.18
CDKN3-211ENST00000611205 FGBP02675 491 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 PDHBP11177 359 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 SLC30A10Q6XR72 485 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 HERVK_113Q902F9 699 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 RILPL2Q969X0 211 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 GAS2L1Q99501 681 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-211ENST00000611205 NOC4LQ9BVI4 516 aaKnown RBP28.69■■■□□ 2.18
CDKN3-211ENST00000611205 WDR11Q9BZH6 1224 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 CXXC1Q9P0U4 656 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-211ENST00000611205 ZMYM6O95789 1325 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 CCDC171Q6TFL3 1326 aa28.69■■■□□ 2.18
CDKN3-211ENST00000611205 MFSD6Q6ZSS7 791 aa28.68■■■□□ 2.18
CDKN3-211ENST00000611205 OTOP2Q7RTS6 562 aa28.68■■■□□ 2.18
CDKN3-211ENST00000611205 USP38Q8NB14 1042 aa28.68■■■□□ 2.18
CDKN3-211ENST00000611205 LNPKQ9C0E8 428 aa28.68■■■□□ 2.18
CDKN3-211ENST00000611205 MSRAQ9UJ68 235 aa28.68■■■□□ 2.18
CDKN3-211ENST00000611205 AKNAD1Q5T1N1 836 aa28.67■■■□□ 2.18
CDKN3-211ENST00000611205 RNF207Q6ZRF8 634 aa28.67■■■□□ 2.18
CDKN3-211ENST00000611205 PRDM12Q9H4Q4 367 aa28.67■■■□□ 2.18
CDKN3-211ENST00000611205 LOC102724159A0A0B4J2E5 919 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 MYL3P08590 195 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 ZNF543Q08ER8 600 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 PWP2Q15269 919 aaKnown RBP28.66■■■□□ 2.18
CDKN3-211ENST00000611205 RAB30Q15771 203 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 OR6J1Q8NGC5 347 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 CLEC4DQ8WXI8 215 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 PPM1EQ8WY54 764 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 WNT8AQ9H1J5 351 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 POLR3EQ9NVU0 708 aa28.66■■■□□ 2.18
CDKN3-211ENST00000611205 LAMA4Q16363 1823 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 TICAM2Q86XR7 235 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 TBC1D10CQ8IV04 446 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 TTC14Q96N46 770 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 ALDH8A1Q9H2A2 487 aaPredicted RBP28.65■■■□□ 2.18
CDKN3-211ENST00000611205 PNMA2Q9UL42 364 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 SCN5AQ14524 2016 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 MYH6P13533 1939 aa28.65■■■□□ 2.18
CDKN3-211ENST00000611205 CPT1AP50416 773 aa28.64■■■□□ 2.18
CDKN3-211ENST00000611205 PDE4DQ08499 809 aa28.64■■■□□ 2.18
CDKN3-211ENST00000611205 SCLYQ96I15 445 aa28.64■■■□□ 2.18
CDKN3-211ENST00000611205 MPHOSPH6Q99547 160 aaKnown RBP28.64■■■□□ 2.18
CDKN3-211ENST00000611205 ZKSCAN3Q9BRR0 538 aa28.64■■■□□ 2.18
CDKN3-211ENST00000611205 NKX2-4Q9H2Z4 354 aa28.64■■■□□ 2.18
CDKN3-211ENST00000611205 GPHNQ9NQX3 736 aaPredicted RBP28.64■■■□□ 2.18
CDKN3-211ENST00000611205 PRUNE2Q8WUY3 3088 aa28.63■■■□□ 2.17
CDKN3-211ENST00000611205 RBM47A0AV96 593 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 PCP11498 1178 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 RPS6P62753 249 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 PURAQ00577 322 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 RPUSD2Q8IZ73 545 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 SYMPKQ92797 1274 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 RNF41Q9H4P4 317 aaPredicted RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 TRMT13Q9NUP7 481 aaKnown RBP28.63■■■□□ 2.17
CDKN3-211ENST00000611205 GOLGA8HP0CJ92 632 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 MFAP1P55081 439 aaKnown RBP28.62■■■□□ 2.17
CDKN3-211ENST00000611205 PPP2R5BQ15173 497 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 USH1GQ495M9 461 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 B4GALNT3Q6L9W6 998 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 ESR2Q92731 530 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 SCN10AQ9Y5Y9 1956 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 TNKSO95271 1327 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 NEDD4P46934 1319 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 WDR19Q8NEZ3 1342 aa28.62■■■□□ 2.17
CDKN3-211ENST00000611205 ZBBXA8MT70 800 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 SUPT20HL2P0C7V6 817 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 SNHG28P0DPA3 235 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 CYP2C9P11712 490 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 BRDTQ58F21 947 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-211ENST00000611205 FAM47CQ5HY64 1035 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 MTG1Q9BT17 334 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-211ENST00000611205 SLC28A3Q9HAS3 691 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 PRDM6Q9NQX0 595 aa28.61■■■□□ 2.17
CDKN3-211ENST00000611205 SDSP20132 328 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 GPATCH4Q5T3I0 446 aaKnown RBP28.6■■■□□ 2.17
CDKN3-211ENST00000611205 COPS5Q92905 334 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 UBA5Q9GZZ9 404 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 CPVLQ9H3G5 476 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 YBX2Q9Y2T7 364 aaKnown RBP28.6■■■□□ 2.17
CDKN3-211ENST00000611205 SLC4A7Q9Y6M7 1214 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 RAD50Q92878 1312 aa28.6■■■□□ 2.17
CDKN3-211ENST00000611205 ZNF213O14771 459 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 NKRFO15226 690 aaKnown RBP eCLIP28.59■■■□□ 2.17
CDKN3-211ENST00000611205 IGFBP4P22692 258 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 RABGGTBP53611 331 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 DNERQ8NFT8 737 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 SCFD2Q8WU76 684 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 PPP1R13LQ8WUF5 828 aa28.59■■■□□ 2.17
CDKN3-211ENST00000611205 B4DLN1 442 aa28.58■■■□□ 2.17
CDKN3-211ENST00000611205 MRPL12P52815 198 aaKnown RBP28.58■■■□□ 2.17
CDKN3-211ENST00000611205 TJAP1Q5JTD0 557 aa28.58■■■□□ 2.17
CDKN3-211ENST00000611205 DEFB128Q7Z7B8 93 aa28.58■■■□□ 2.17
CDKN3-211ENST00000611205 TANC1Q9C0D5 1861 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 TXNP10599 105 aaKnown RBP28.57■■■□□ 2.16
CDKN3-211ENST00000611205 EDNRBP24530 442 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 ADGRE1Q14246 886 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 CCDC85BQ15834 202 aaPredicted RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms