RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
SGMS1-209ENST00000609445 A0A0C4DFX4 3053 aa18.77■□□□□ 0.59
SGMS1-209ENST00000609445 GRIN2DO15399 1336 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 WDR19Q8NEZ3 1342 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 TLR3O15455 904 aaKnown RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 RPS6P62753 249 aaKnown RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 GPATCH4Q5T3I0 446 aaKnown RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 SLC43A3Q8NBI5 491 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 TTYH1Q9H313 450 aaPredicted RBP18.76■□□□□ 0.59
SGMS1-209ENST00000609445 KAT14Q9H8E8 782 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 ZSWIM5Q9P217 1185 aa18.76■□□□□ 0.59
SGMS1-209ENST00000609445 CD4P01730 458 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 CSF2RAP15509 400 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 PSMC6P62333 389 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 IRX6P78412 446 aaPredicted RBP18.75■□□□□ 0.59
SGMS1-209ENST00000609445 ITGA7Q13683 1181 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 IMMTQ16891 758 aaKnown RBP18.75■□□□□ 0.59
SGMS1-209ENST00000609445 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 C16orf59Q7L2K0 433 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.75■□□□□ 0.593e-7■□□□□ 10.7
SGMS1-209ENST00000609445 WDR11Q9BZH6 1224 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 Q9Y3F1 56 aa18.75■□□□□ 0.59
SGMS1-209ENST00000609445 TNKSO95271 1327 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 ZEB2O60315 1214 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 CABYRO75952 493 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 CYP2C18P33260 490 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 CCDC178Q5BJE1 867 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 ANKS1AQ92625 1134 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 CDX2Q99626 313 aaPredicted RBP18.74■□□□□ 0.59
SGMS1-209ENST00000609445 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
SGMS1-209ENST00000609445 LOC102724159A0A0B4J2E5 919 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
SGMS1-209ENST00000609445 ACRP10323 421 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 PDE4DQ08499 809 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 PPIGQ13427 754 aaKnown RBP eCLIP18.73■□□□□ 0.59
SGMS1-209ENST00000609445 PWP2Q15269 919 aaKnown RBP18.73■□□□□ 0.59
SGMS1-209ENST00000609445 CDC37Q16543 378 aaPredicted RBP18.73■□□□□ 0.59
SGMS1-209ENST00000609445 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 ADGRF4Q8IZF3 695 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 TRPV6Q9H1D0 765 aa18.73■□□□□ 0.59
SGMS1-209ENST00000609445 EDNRBP24530 442 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 NT5C2P49902 561 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 ASPRV1Q53RT3 343 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 TMEM199Q8N511 208 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 OR6J1Q8NGC5 347 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 MYLIPQ8WY64 445 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 COPS5Q92905 334 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 KRT23Q9C075 422 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 MYO9BQ13459 2157 aa18.72■□□□□ 0.59
SGMS1-209ENST00000609445 DLL1O00548 723 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 B4GALT4O60513 344 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 MYL3P08590 195 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 QRICH1Q2TAL8 776 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 ZNF365Q70YC5 407 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 CYB5R4Q7L1T6 521 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 DNERQ8NFT8 737 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 HIPK3Q9H422 1215 aa18.71■□□□□ 0.59
SGMS1-209ENST00000609445 SCN10AQ9Y5Y9 1956 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.7■□□□□ 0.58
SGMS1-209ENST00000609445 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.7■□□□□ 0.58
SGMS1-209ENST00000609445 GRXCR1A8MXD5 290 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
SGMS1-209ENST00000609445 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
SGMS1-209ENST00000609445 DNAJB2P25686 324 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 PTH1RQ03431 593 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 STAG2Q8N3U4 1231 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 PPP1R13LQ8WUF5 828 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 UBAC1Q9BSL1 405 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 CNNM2Q9H8M5 875 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 JMJD4Q9H9V9 463 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 POLR3EQ9NVU0 708 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 COL20A1Q9P218 1284 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 BAZ2BQ9UIF8 2168 aaKnown RBP18.7■□□□□ 0.58
SGMS1-209ENST00000609445 ABCB11O95342 1321 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 CDH23Q9H251 3354 aa18.7■□□□□ 0.58
SGMS1-209ENST00000609445 KIAA1217Q5T5P2 1943 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 ARIH2O95376 493 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 CCL23P55773 120 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 PURAQ00577 322 aaKnown RBP18.69■□□□□ 0.58
SGMS1-209ENST00000609445 PPP2R5BQ15173 497 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 SEC23AQ15436 765 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 IFIT1BQ5T764 474 aaKnown RBP18.69■□□□□ 0.58
SGMS1-209ENST00000609445 RGS22Q8NE09 1264 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 SYTL5Q8TDW5 730 aaPredicted RBP18.69■□□□□ 0.58
SGMS1-209ENST00000609445 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 TAAR1Q96RJ0 339 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 NOC4LQ9BVI4 516 aaKnown RBP18.69■□□□□ 0.58
SGMS1-209ENST00000609445 IL23AQ9NPF7 189 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 UNC80Q8N2C7 3258 aa18.69■□□□□ 0.58
SGMS1-209ENST00000609445 CHMLP26374 656 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms