RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 NUP58Q9BVL2 599 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 TLR10Q9BXR5 811 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 ACTR5Q9H9F9 607 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 TMCO5BA8MYB1 307 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 CABP4P57796 275 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 DRP2Q13474 957 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 OR2W6PQ8NHA6 318 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 TRIM6Q9C030 488 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 GDF3Q9NR23 364 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 HMGB1P1B2RPK0 211 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 PPP1R12AO14974 1030 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 TMOD1P28289 359 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 EIF4A3P38919 411 aaKnown RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
CDCA3-212ENST00000604599 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
CDCA3-212ENST00000604599 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 GOLGA6L10A6NI86 522 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 CRYMQ14894 314 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 ALX1Q15699 326 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-212ENST00000604599 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 RETREG2Q8NC44 543 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 KRT12Q99456 494 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
CDCA3-212ENST00000604599 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-212ENST00000604599 TNKSO95271 1327 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 GMNCA6NCL1 334 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 PP2D1A8MPX8 630 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 EPHB6O15197 1021 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-212ENST00000604599 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 SYNE4Q8N205 404 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 GGA2Q9UJY4 613 aa13.78□□□□□ -0.2
CDCA3-212ENST00000604599 SMIM22K7EJ46 135 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 CYP27B1O15528 508 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 NPY5RQ15761 445 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.2
CDCA3-212ENST00000604599 EMC10Q5UCC4 262 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 CD302Q8IX05 232 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.2
CDCA3-212ENST00000604599 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.2
CDCA3-212ENST00000604599 LEMD3Q9Y2U8 911 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 DISP2A7MBM2 1401 aa13.77□□□□□ -0.2
CDCA3-212ENST00000604599 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 SCTRP47872 440 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 RASSF7Q02833 373 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 HLTFQ14527 1009 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDCA3-212ENST00000604599 KLHDC7AQ5VTJ3 777 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 MEGF6O75095 1541 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 MAGEA1P43355 309 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 MIIPQ5JXC2 388 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 MREGQ8N565 214 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
CDCA3-212ENST00000604599 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 ERCC3P19447 782 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 FMNL3Q8IVF7 1028 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 TTLL11Q8NHH1 800 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 SEC16BQ96JE7 1060 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 PYM1Q9BRP8 204 aaKnown RBP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 TMBIM4Q9HC24 238 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 PACSIN2Q9UNF0 486 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 GCOM1H8Y6P7 765 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-212ENST00000604599 FTCDO95954 541 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 MYZAPP0CAP1 466 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 CDK17Q00537 523 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 NAALADL2Q58DX5 795 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 ODF2Q5BJF6 829 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 MIGA1Q8NAN2 632 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
CDCA3-212ENST00000604599 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 KLRC4O43908 158 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 SLC1A4P43007 532 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms