RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PDE8BO95263 885 aa23.02■■□□□ 1.28
SH3D19-211ENST00000604030 IFNAR1P17181 557 aa23.02■■□□□ 1.28
SH3D19-211ENST00000604030 FKBP3Q00688 224 aaKnown RBP23.02■■□□□ 1.28
SH3D19-211ENST00000604030 PSMD6Q15008 389 aa23.02■■□□□ 1.28
SH3D19-211ENST00000604030 DBNLQ9UJU6 430 aaKnown RBP23.02■■□□□ 1.28
SH3D19-211ENST00000604030 ARHGAP42A6NI28 874 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 K7ENM7 598 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 NSFP46459 744 aaKnown RBP23.01■■□□□ 1.27
SH3D19-211ENST00000604030 C8orf37Q96NL8 207 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 TNNC2P02585 160 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 SLMAPQ14BN4 828 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 HAUS8Q9BT25 410 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 HEXIM1O94992 359 aaKnown RBP23.01■■□□□ 1.27
SH3D19-211ENST00000604030 NSMFQ6X4W1 530 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 FBXO11Q86XK2 927 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
SH3D19-211ENST00000604030 LRRD1A4D1F6 860 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 LIG4P49917 911 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 RESTQ13127 1097 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 PRR16Q569H4 304 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 ARHGEF18Q6ZSZ5 1173 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 CCDC17Q96LX7 622 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 MAN1B1Q9UKM7 699 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
SH3D19-211ENST00000604030 ERVK-7P63135 1459 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 KRT19P08727 400 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 MAP7D3Q8IWC1 876 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 RASSF7Q02833 373 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 MMP1P03956 469 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 ERCC3P19447 782 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 EMBQ6PCB8 327 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
SH3D19-211ENST00000604030 PTCH1Q13635 1447 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 PTK2Q05397 1052 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 DBN1Q16643 649 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 ARMCX5Q6P1M9 558 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 TACO1Q9BSH4 297 aaKnown RBP23■■□□□ 1.27
SH3D19-211ENST00000604030 USP40Q9NVE5 1235 aa23■■□□□ 1.27
SH3D19-211ENST00000604030 SRPRBQ9Y5M8 271 aaKnown RBP23■■□□□ 1.27
SH3D19-211ENST00000604030 RFC1P35251 1148 aaPredicted RBP22.99■■□□□ 1.27
SH3D19-211ENST00000604030 AFPP02771 609 aaKnown RBP22.99■■□□□ 1.27
SH3D19-211ENST00000604030 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
SH3D19-211ENST00000604030 RNF8O76064 485 aa22.99■■□□□ 1.27
SH3D19-211ENST00000604030 CFAP61Q8NHU2 1237 aa22.99■■□□□ 1.27
SH3D19-211ENST00000604030 RIOK1Q9BRS2 568 aaKnown RBP22.99■■□□□ 1.27
SH3D19-211ENST00000604030 CLTAP09496 248 aa22.99■■□□□ 1.27
SH3D19-211ENST00000604030 CCNE1P24864 410 aa22.99■■□□□ 1.27
SH3D19-211ENST00000604030 GLE1Q53GS7 698 aaKnown RBP22.99■■□□□ 1.27
SH3D19-211ENST00000604030 RINT1Q6NUQ1 792 aa22.99■■□□□ 1.27
SH3D19-211ENST00000604030 PSMC2P35998 433 aaKnown RBP22.98■■□□□ 1.27
SH3D19-211ENST00000604030 MYL7Q01449 175 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 RPS6KA2Q15349 733 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 MAGOHBQ96A72 148 aaKnown RBP22.98■■□□□ 1.27
SH3D19-211ENST00000604030 MAP3K15Q6ZN16 1313 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 ATF7P17544 494 aaPredicted RBP22.98■■□□□ 1.27
SH3D19-211ENST00000604030 RDH13Q8NBN7 331 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 IVNS1ABPQ9Y6Y0 642 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 MYO1FO00160 1098 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 LIFRP42702 1097 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 AS3MTQ9HBK9 375 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 MFSD14BQ5SR56 506 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 TRIM50Q86XT4 487 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.98■■□□□ 1.27
SH3D19-211ENST00000604030 NT5C1BQ96P26 610 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 PARD6BQ9BYG5 372 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 ZNF148Q9UQR1 794 aa22.98■■□□□ 1.27
SH3D19-211ENST00000604030 ARL6IP4Q66PJ3 421 aaKnown RBP22.97■■□□□ 1.27
SH3D19-211ENST00000604030 FAM102BQ5T8I3 360 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 RNF168Q8IYW5 571 aaPredicted RBP22.97■■□□□ 1.27
SH3D19-211ENST00000604030 CALR3Q96L12 384 aaKnown RBP22.97■■□□□ 1.27
SH3D19-211ENST00000604030 AFG3L2Q9Y4W6 797 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 PFDN6O15212 129 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 CUL1Q13616 776 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 GPHNQ9NQX3 736 aaPredicted RBP22.97■■□□□ 1.27
SH3D19-211ENST00000604030 DMP1Q13316 513 aaPredicted RBP22.97■■□□□ 1.27
SH3D19-211ENST00000604030 EPB41L5Q9HCM4 733 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 TXLNGQ9NUQ3 528 aa22.97■■□□□ 1.27
SH3D19-211ENST00000604030 CLCN6P51797 869 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 TNFAIP1Q13829 316 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 CDC37Q16543 378 aaPredicted RBP22.96■■□□□ 1.27
SH3D19-211ENST00000604030 CCDC93Q567U6 631 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 TMED8Q6PL24 325 aaPredicted RBP22.96■■□□□ 1.27
SH3D19-211ENST00000604030 SART1O43290 800 aaKnown RBP22.96■■□□□ 1.27
SH3D19-211ENST00000604030 PPM1KQ8N3J5 372 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 EFCC1Q9HA90 598 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 DIS3Q9Y2L1 958 aaKnown RBP22.96■■□□□ 1.27
SH3D19-211ENST00000604030 KRT3P12035 628 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 LRRC24Q50LG9 513 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 HESX1Q9UBX0 185 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 H0YIN7 160 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 PRPF3O43395 683 aaKnown RBP22.96■■□□□ 1.27
SH3D19-211ENST00000604030 CA8P35219 290 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 CPXCR1Q8N123 301 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 BPIFA3Q9BQP9 254 aa22.96■■□□□ 1.27
SH3D19-211ENST00000604030 SH2B2O14492 632 aaPredicted RBP22.95■■□□□ 1.27
SH3D19-211ENST00000604030 SERPING1P05155 500 aa22.95■■□□□ 1.27
SH3D19-211ENST00000604030 IFT88Q13099 833 aa22.95■■□□□ 1.27
SH3D19-211ENST00000604030 PPP4R3CPQ6ZMV5 832 aa22.95■■□□□ 1.27
SH3D19-211ENST00000604030 PLA2G4DQ86XP0 818 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms