RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 HOMER1Q86YM7 354 aa28.1■■■□□ 2.09
UBE2E3-213ENST00000602959 DDX49Q9Y6V7 483 aaKnown RBP28.1■■■□□ 2.09
UBE2E3-213ENST00000602959 PNMA6FA0A0J9YX94 578 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 ADCY6O43306 1168 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 DUSP11O75319 330 aaKnown RBP28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 GNAQP50148 359 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 GHRHRQ02643 423 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 TRAF1Q13077 416 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 TCEANC2Q96MN5 208 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 VTA1Q9NP79 307 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 PCDHA1Q9Y5I3 950 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 SYNRGQ9UMZ2 1314 aa28.09■■■□□ 2.09
UBE2E3-213ENST00000602959 OPLAHO14841 1288 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 EVI5O60447 810 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 ADAMTS4O75173 837 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 PGK1P00558 417 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 RNF180Q86T96 592 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 TBC1D5Q92609 795 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 NR2E3Q9Y5X4 410 aa28.08■■■□□ 2.09
UBE2E3-213ENST00000602959 DNAH12Q6ZR08 3092 aa28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 RXRAP19793 462 aa28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 EDNRBP24530 442 aa28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 APOA5Q6Q788 366 aa28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 SYTL5Q8TDW5 730 aaPredicted RBP28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 JAKMIP1Q96N16 626 aaKnown RBP28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 SENP6Q9GZR1 1112 aaPredicted RBP28.07■■■□□ 2.08
UBE2E3-213ENST00000602959 H0YGN5 161 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 PLEKHA8P1O95397 391 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 TAPT1Q6NXT6 567 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 MICU3Q86XE3 530 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 FBXO16Q8IX29 292 aaPredicted RBP28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 FANCBQ8NB91 859 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 MPHOSPH6Q99547 160 aaKnown RBP28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 USP26Q9BXU7 913 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 UPF3AQ9H1J1 476 aaKnown RBP28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 COL20A1Q9P218 1284 aa28.06■■■□□ 2.08
UBE2E3-213ENST00000602959 MYCNP04198 464 aaPredicted RBP28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 HSD17B4P51659 736 aa28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 SYNE3Q6ZMZ3 975 aa28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 SRBD1Q8N5C6 995 aaKnown RBP28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 SAMD3Q8N6K7 520 aa28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 RRP36Q96EU6 259 aaKnown RBP28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 MAP3K20Q9NYL2 800 aaKnown RBP28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 PHF24Q9UPV7 400 aa28.05■■■□□ 2.08
UBE2E3-213ENST00000602959 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 B4DLN1 442 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 CST5P28325 142 aaPredicted RBP28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 ADCYAP1R1P41586 468 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 MRPL12P52815 198 aaKnown RBP28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 TNFAIP2Q03169 654 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 LRRC26Q2I0M4 334 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 BLOC1S2Q6QNY1 142 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 TMTC3Q6ZXV5 915 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 EEPD1Q7L9B9 569 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 RAB11FIP4Q86YS3 637 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 KLHDC9Q8NEP7 349 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 BRPF3Q9ULD4 1205 aa28.04■■■□□ 2.08
UBE2E3-213ENST00000602959 CFBP00751 764 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 CPA1P15085 419 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 PSMA5P28066 241 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 RCAN1P53805 252 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 GJA9P57773 515 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 NKX3-2P78367 333 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 PDE4DQ08499 809 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 IQSEC1Q6DN90 963 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 FBXL16Q8N461 479 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 NSUN6Q8TEA1 469 aaKnown RBP28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 TSEN34Q9BSV6 310 aaKnown RBP28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 PDGFCQ9NRA1 345 aa28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 GNEQ9Y223 722 aaKnown RBP28.03■■■□□ 2.08
UBE2E3-213ENST00000602959 RPS6KB1P23443 525 aa28.02■■■□□ 2.08
UBE2E3-213ENST00000602959 TAAR1Q96RJ0 339 aa28.02■■■□□ 2.08
UBE2E3-213ENST00000602959 SPC25Q9HBM1 224 aa28.02■■■□□ 2.08
UBE2E3-213ENST00000602959 RBM28Q9NW13 759 aaKnown RBP28.02■■■□□ 2.08
UBE2E3-213ENST00000602959 SEC63Q9UGP8 760 aaKnown RBP28.02■■■□□ 2.08
UBE2E3-213ENST00000602959 KIAA1217Q5T5P2 1943 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 RBM47A0AV96 593 aaKnown RBP28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 ZBTB43O43298 467 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 SMPD1P17405 629 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 CCSAPQ6IQ19 270 aaPredicted RBP28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 C7orf61Q8IZ16 206 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 CMTR1Q8N1G2 835 aaKnown RBP28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 PIBF1Q8WXW3 757 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 RMDN3Q96TC7 470 aa28.01■■■□□ 2.07
UBE2E3-213ENST00000602959 KLF18A0A0U1RQI7 1052 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 MYADML2A6NDP7 307 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 C6orf222P0C671 652 aaPredicted RBP28■■■□□ 2.07
UBE2E3-213ENST00000602959 CASTP20810 708 aaKnown RBP28■■■□□ 2.07
UBE2E3-213ENST00000602959 SNX17Q15036 470 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 Q6ZUG5 572 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 IWS1Q96ST2 819 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 AGXT2Q9BYV1 514 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 Q9Y3F1 56 aa28■■■□□ 2.07
UBE2E3-213ENST00000602959 MOXD2PA6NHM9 499 aa27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 CTAGE5O15320 804 aa27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 ATN1P54259 1190 aaPredicted RBP27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 FGD1P98174 961 aa27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 RTN1Q16799 776 aa27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 DUSP28Q4G0W2 176 aa27.99■■■□□ 2.07
UBE2E3-213ENST00000602959 TLK2Q86UE8 772 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms