RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 LCTP09848 1927 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 CD4P01730 458 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 CALML3P27482 149 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 ITGA7Q13683 1181 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 RNF207Q6ZRF8 634 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 DGKHQ86XP1 1220 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 TMEM199Q8N511 208 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 SLC43A3Q8NBI5 491 aa24.87■■□□□ 1.57
PPFIA3-209ENST00000602783 GOLGA8HP0CJ92 632 aa24.86■■□□□ 1.57
PPFIA3-209ENST00000602783 CSF2RAP15509 400 aa24.86■■□□□ 1.57
PPFIA3-209ENST00000602783 SLC30A10Q6XR72 485 aa24.86■■□□□ 1.57
PPFIA3-209ENST00000602783 C16orf59Q7L2K0 433 aa24.86■■□□□ 1.57
PPFIA3-209ENST00000602783 LOC102724159A0A0B4J2E5 919 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 KDM4AO75164 1064 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 PWP2Q15269 919 aaKnown RBP24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 DUSP28Q4G0W2 176 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 TMEM240Q5SV17 173 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 GPATCH4Q5T3I0 446 aaKnown RBP24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 MYLIPQ8WY64 445 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 DSCC1Q9BVC3 393 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 WDR11Q9BZH6 1224 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 UBA5Q9GZZ9 404 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 IL25Q9H293 177 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 GRIN2DO15399 1336 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 WDR19Q8NEZ3 1342 aa24.85■■□□□ 1.57
PPFIA3-209ENST00000602783 ACRP10323 421 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 CYP2C18P33260 490 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 PSMC6P62333 389 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 RPS6P62753 249 aaKnown RBP24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 CCDC178Q5BJE1 867 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 IQCA1Q86XH1 822 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 CPVLQ9H3G5 476 aa24.84■■□□□ 1.57
PPFIA3-209ENST00000602783 USH1GQ495M9 461 aa24.83■■□□□ 1.57
PPFIA3-209ENST00000602783 PNMA1Q8ND90 353 aa24.83■■□□□ 1.57
PPFIA3-209ENST00000602783 SEZ6LQ9BYH1 1024 aa24.83■■□□□ 1.57
PPFIA3-209ENST00000602783 KAT14Q9H8E8 782 aa24.83■■□□□ 1.57
PPFIA3-209ENST00000602783 TMEM265A0A087WTH1 108 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 B4E1Z4 1266 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 NT5C2P49902 561 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 PDE4DQ08499 809 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 ZNF365Q70YC5 407 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 MPHOSPH6Q99547 160 aaKnown RBP24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 TRPV6Q9H1D0 765 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 HIPK3Q9H422 1215 aa24.82■■□□□ 1.56
PPFIA3-209ENST00000602783 RBM47A0AV96 593 aaKnown RBP24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 DNAJB2P25686 324 aa24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 IMMTQ16891 758 aaKnown RBP24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 DNERQ8NFT8 737 aa24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 MAFAQ8NHW3 353 aaPredicted RBP24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 ANKS1AQ92625 1134 aa24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 ZSCAN10Q96SZ4 725 aaPredicted RBP24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 ZSWIM5Q9P217 1185 aa24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 RAD50Q92878 1312 aa24.81■■□□□ 1.56
PPFIA3-209ENST00000602783 B4GALT4O60513 344 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 PSRC1Q6PGN9 363 aaPredicted RBP24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 IL23AQ9NPF7 189 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 POLR3EQ9NVU0 708 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 CTNNA3Q9UI47 895 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 UNC80Q8N2C7 3258 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 UMODL1Q5DID0 1318 aa24.8■■□□□ 1.56
PPFIA3-209ENST00000602783 CUL9Q8IWT3 2517 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 MYL3P08590 195 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 FOSL2P15408 326 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 CPT1AP50416 773 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 CCL23P55773 120 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 CDC37Q16543 378 aaPredicted RBP24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 RASIP1Q5U651 963 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 RGS22Q8NE09 1264 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 OR6J1Q8NGC5 347 aa24.79■■□□□ 1.56
PPFIA3-209ENST00000602783 GRXCR1A8MXD5 290 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 B4DLN1 442 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 EDNRBP24530 442 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 MRPL12P52815 198 aaKnown RBP24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 GRIN2CQ14957 1233 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 ADGRF4Q8IZF3 695 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 ENAHQ8N8S7 591 aaPredicted RBP24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 TIFAQ96CG3 184 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 NOC4LQ9BVI4 516 aaKnown RBP24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 KRT23Q9C075 422 aa24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 GPHNQ9NQX3 736 aaPredicted RBP24.78■■□□□ 1.56
PPFIA3-209ENST00000602783 CDH23Q9H251 3354 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 FGBP02675 491 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 PURAQ00577 322 aaKnown RBP24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 PPP2R5BQ15173 497 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 SCFD2Q8WU76 684 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 TBC1D5Q92609 795 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 ALDH8A1Q9H2A2 487 aaPredicted RBP24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 ZNF576Q9H609 170 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 TNKSO95271 1327 aa24.77■■□□□ 1.56
PPFIA3-209ENST00000602783 NKRFO15226 690 aaKnown RBP eCLIP24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 DHX16O60231 1041 aaKnown RBP24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 CHMLP26374 656 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 ASPRV1Q53RT3 343 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 BRDTQ58F21 947 aaPredicted RBP24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 HERVK_113Q902F9 699 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 COPS5Q92905 334 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 MTG1Q9BT17 334 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms