RNA–Protein interactions for RNA: ENST00000602647.5

SFXN2-207, Transcript of sideroflexin 2, humanhuman

TSL 3

Gene SFXN2, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-207ENST00000602647 GMCL1Q96IK5 515 aa18.89■□□□□ 0.61
SFXN2-207ENST00000602647 TMEM87BQ96K49 555 aa18.89■□□□□ 0.61
SFXN2-207ENST00000602647 ELP1O95163 1332 aa18.89■□□□□ 0.61
SFXN2-207ENST00000602647 A0A0U1RQG5 324 aaPredicted RBP18.88■□□□□ 0.61
SFXN2-207ENST00000602647 EPHB4P54760 987 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 GNASQ5JWF2 1037 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 KCTD1Q719H9 257 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 PNMA1Q8ND90 353 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 MAFAQ8NHW3 353 aaPredicted RBP18.88■□□□□ 0.61
SFXN2-207ENST00000602647 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 FGD4Q96M96 766 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 AGBL1Q96MI9 1066 aa18.88■□□□□ 0.61
SFXN2-207ENST00000602647 ASB14A6NK59 587 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 ADCY6O43306 1168 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 GJA9P57773 515 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 ANAPC15P60006 121 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 IRX5P78411 483 aaPredicted RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 EXOSC10Q01780 885 aaKnown RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 TKFCQ3LXA3 575 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 WDR19Q8NEZ3 1342 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 DCAF4Q8WV16 495 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 TRERF1Q96PN7 1200 aa18.87■□□□□ 0.61
SFXN2-207ENST00000602647 UPF3AQ9H1J1 476 aaKnown RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 A1CFQ9NQ94 594 aaKnown RBP18.87■□□□□ 0.61
SFXN2-207ENST00000602647 MCM3APO60318 1980 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 SH2B2O14492 632 aaPredicted RBP18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TIMP1P01033 207 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 FOSL2P15408 326 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 CASTP20810 708 aaKnown RBP18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TNFAIP2Q03169 654 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TCEANC2Q96MN5 208 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 LRRC2Q9BYS8 371 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TTYH1Q9H313 450 aaPredicted RBP18.86■□□□□ 0.61
SFXN2-207ENST00000602647 VCANP13611 3396 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
SFXN2-207ENST00000602647 TMEM265A0A087WTH1 108 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 ARVCFO00192 962 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 PDHBP11177 359 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 CPA1P15085 419 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 SNAP25P60880 206 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
SFXN2-207ENST00000602647 RASGRP2Q7LDG7 609 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 AP5M1Q9H0R1 490 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
SFXN2-207ENST00000602647 TBX21Q9UL17 535 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
SFXN2-207ENST00000602647 ZNF536O15090 1300 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.84■□□□□ 0.61
SFXN2-207ENST00000602647 PLA2G6O60733 806 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 LIFRP42702 1097 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 BEX3Q00994 111 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 MFSD5Q6N075 450 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 NSMFQ6X4W1 530 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 NFXL1Q6ZNB6 911 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 TLK2Q86UE8 772 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
SFXN2-207ENST00000602647 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
SFXN2-207ENST00000602647 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.6
SFXN2-207ENST00000602647 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.6
SFXN2-207ENST00000602647 SOWAHBA6NEL2 793 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 CCDC69A6NI79 296 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 DNAJB2P25686 324 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 FGD1P98174 961 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 RUFY3Q7L099 469 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 CATIPQ7Z7H3 387 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.6
SFXN2-207ENST00000602647 COL25A1Q9BXS0 654 aaPredicted RBP18.83■□□□□ 0.6
SFXN2-207ENST00000602647 KATNBL1Q9H079 304 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 GPCPD1Q9NPB8 672 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.6
SFXN2-207ENST00000602647 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
SFXN2-207ENST00000602647 ZEB2O60315 1214 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 CDK7P50613 346 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 ZNF543Q08ER8 600 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 FSCN1Q16658 493 aaKnown RBP18.82■□□□□ 0.6
SFXN2-207ENST00000602647 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 GPATCH4Q5T3I0 446 aaKnown RBP18.82■□□□□ 0.6
SFXN2-207ENST00000602647 CXCL17Q6UXB2 119 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 EEPD1Q7L9B9 569 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
SFXN2-207ENST00000602647 BACH2Q9BYV9 841 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 CYP39A1Q9NYL5 469 aa18.82■□□□□ 0.6
SFXN2-207ENST00000602647 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms