RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 FHOD1Q9Y613 1164 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 NUDT19A8MXV4 375 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 C1QTNF3-AMACRE9PGA6 284 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 STK10O94804 968 aaKnown RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 PRAMEF1O95521 474 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 ITGB3P05106 788 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 CD247P20963 164 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 CTSKP43235 329 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 CBX2Q14781 532 aaPredicted RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 FXNQ16595 210 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 DDR2Q16832 855 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 TDRD10Q5VZ19 366 aaKnown RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 DCAF15Q66K64 600 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 MRM1Q6IN84 353 aaKnown RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 VHLLQ6RSH7 139 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 TMC3Q7Z5M5 1100 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 NLGN1Q8N2Q7 840 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 MICAL1Q8TDZ2 1067 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 HNRNPLLQ8WVV9 542 aaKnown RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF669Q96BR6 464 aaPredicted RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 TCTN2Q96GX1 697 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 RCC1LQ96I51 464 aaKnown RBP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 RBM15Q96T37 977 aaKnown RBP eCLIP4.46□□□□□ -1.7
SGMS1-207ENST00000602619 SPATA25Q9BR10 227 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 WHRNQ9P202 907 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 TCFL5Q9UL49 500 aa4.46□□□□□ -1.7
SGMS1-207ENST00000602619 ANKRD34BA5PLL1 514 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 FAM86C2PA6NEL3 165 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 FADS2P1A8MWK0 482 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CAPNS1P04632 268 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 ARL4AP40617 200 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CHMP4BP1P59074 171 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF445P59923 1031 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 PPP2R5EQ16537 467 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 GNPTABQ3T906 1256 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 HSF5Q4G112 596 aaPredicted RBP4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CPZQ66K79 652 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 GALNT18Q6P9A2 607 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 C6orf15Q6UXA7 325 aaPredicted RBP4.45□□□□□ -1.7
SGMS1-207ENST00000602619 LIPIQ6XZB0 460 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 FAM178BQ8IXR5 827 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CCDC144CPQ8IYA2 1237 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CKAP2LQ8IYA6 745 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 CELF2-AS1Q8N7Q2 184 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 LINC00116Q8NCU8 138 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 DDX1Q92499 740 aaKnown RBP4.45□□□□□ -1.7
SGMS1-207ENST00000602619 UBXN4Q92575 508 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 EPN3Q9H201 632 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 PCDHB10Q9UN67 800 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF451Q9Y4E5 1061 aa4.45□□□□□ -1.7
SGMS1-207ENST00000602619 SSU72P8A0A1W2PR75 194 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 FKTNO75072 461 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF205O95201 554 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 SLPIP03973 132 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
SGMS1-207ENST00000602619 EPHX1P07099 455 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 ITGA4P13612 1032 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 BMP8BP34820 402 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 PCBP3P57721 371 aaKnown RBP4.44□□□□□ -1.7
SGMS1-207ENST00000602619 TMEM62Q0P6H9 643 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 LAPTM5Q13571 262 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 SOGA3Q5TF21 947 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 KIAA1211LQ6NV74 962 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 RPTNQ6XPR3 784 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 LRP10Q7Z4F1 713 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 ARHGEF39Q8N4T4 335 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 FNIP1Q8TF40 1166 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF526Q8TF50 670 aaPredicted RBP4.44□□□□□ -1.7
SGMS1-207ENST00000602619 MKL1Q969V6 931 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 DRC1Q96MC2 740 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 MRIQ9BWK5 157 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 C1QTNF3Q9BXJ4 246 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 ASCC2Q9H1I8 757 aaPredicted RBP4.44□□□□□ -1.7
SGMS1-207ENST00000602619 CHST7Q9NS84 486 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 GFOD1Q9NXC2 390 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 TNFRSF10DQ9UBN6 386 aa4.44□□□□□ -1.7
SGMS1-207ENST00000602619 WTIPA6NIX2 430 aaPredicted RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 B2RBV5 119 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 NOBOXO60393 691 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 GJB6O95452 261 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 TP53P04637 393 aaPredicted RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 GSNP06396 782 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 SYPP08247 313 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 NAT2P11245 290 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF20P17024 532 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 PRKCAP17252 672 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 ENDOUP21128 410 aaKnown RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 FBLN1P23142 703 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 CNR2P34972 360 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 FOXO4P98177 505 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 ZNF200P98182 395 aaPredicted RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 CYP4F8P98187 520 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 GRB10Q13322 594 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 RASA3Q14644 834 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 TCEAL1Q15170 157 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 HEATR6Q6AI08 1181 aaKnown RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 ST13P5Q8NFI4 369 aaPredicted RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 CCDC113Q9H0I3 377 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 GBP3Q9H0R5 595 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms