RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 NSUN3Q9H649 340 aaKnown RBP17.34■□□□□ 0.37
TRIM11-205ENST00000602308 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 POLR3EQ9NVU0 708 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 FBXO40Q9UH90 709 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 FPGT-TNNI3KV9GXZ4 949 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 NAV1Q8NEY1 1877 aa17.33■□□□□ 0.37
TRIM11-205ENST00000602308 ASB14A6NK59 587 aa17.33■□□□□ 0.36
TRIM11-205ENST00000602308 MYL3P08590 195 aa17.33■□□□□ 0.36
TRIM11-205ENST00000602308 LRRFIP1Q32MZ4 808 aaKnown RBP17.33■□□□□ 0.36
TRIM11-205ENST00000602308 EPC2Q52LR7 807 aa17.33■□□□□ 0.36
TRIM11-205ENST00000602308 CNKSR3Q6P9H4 555 aa17.33■□□□□ 0.36
TRIM11-205ENST00000602308 PRPF38AQ8NAV1 312 aaKnown RBP17.33■□□□□ 0.36
TRIM11-205ENST00000602308 SDR42E1Q8WUS8 393 aa17.33■□□□□ 0.36
TRIM11-205ENST00000602308 DCP1AQ9NPI6 582 aaPredicted RBP17.33■□□□□ 0.36
TRIM11-205ENST00000602308 H3BNC9 293 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 ZBED4O75132 1171 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 NBL1P41271 181 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 ASIC4Q96FT7 647 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 MTG1Q9BT17 334 aaPredicted RBP17.32■□□□□ 0.36
TRIM11-205ENST00000602308 KANSL2Q9H9L4 492 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
TRIM11-205ENST00000602308 NCOR2Q9Y618 2525 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 TRIP12Q14669 1992 aaPredicted RBP17.31■□□□□ 0.36
TRIM11-205ENST00000602308 MAGEB6P1A0A0J9YX57 407 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 ABHD14A-ACY1A0A1B0GW23 586 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 NBNO60934 754 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 CXCL10P02778 98 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 SIGLEC14Q08ET2 396 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 SMAD4Q13485 552 aaKnown RBP17.31■□□□□ 0.36
TRIM11-205ENST00000602308 GPM6BQ13491 265 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
TRIM11-205ENST00000602308 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
TRIM11-205ENST00000602308 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 INSL6Q9Y581 213 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 TPRP12270 2363 aaKnown RBP17.31■□□□□ 0.36
TRIM11-205ENST00000602308 SCN10AQ9Y5Y9 1956 aa17.31■□□□□ 0.36
TRIM11-205ENST00000602308 CDK8P49336 464 aa17.3■□□□□ 0.36
TRIM11-205ENST00000602308 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
TRIM11-205ENST00000602308 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
TRIM11-205ENST00000602308 CNTNAP3BQ96NU0 1288 aa17.3■□□□□ 0.36
TRIM11-205ENST00000602308 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
TRIM11-205ENST00000602308 CNTNAP3Q9BZ76 1288 aa17.3■□□□□ 0.36
TRIM11-205ENST00000602308 DMXL1Q9Y485 3027 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 NCK2O43639 380 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 HTRA4P83105 476 aaPredicted RBP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
TRIM11-205ENST00000602308 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
TRIM11-205ENST00000602308 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 USP17L21D6R901 530 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 GALR2O43603 387 aaPredicted RBP17.28■□□□□ 0.36
TRIM11-205ENST00000602308 KDM4AO75164 1064 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 TBX10O75333 385 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 SELPP16109 830 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 CPT1AP50416 773 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
TRIM11-205ENST00000602308 HYAL1Q12794 435 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 LRRC8DQ7L1W4 858 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
TRIM11-205ENST00000602308 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
TRIM11-205ENST00000602308 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 F5H6K3 240 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 NDUFB10O96000 172 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 NUBP1P53384 320 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 OAZ1P54368 228 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 KLRC3Q07444 240 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 IKBKEQ14164 716 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
TRIM11-205ENST00000602308 PTGISQ16647 500 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.36
TRIM11-205ENST00000602308 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
TRIM11-205ENST00000602308 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 VTA1Q9NP79 307 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 CD207Q9UJ71 328 aa17.27■□□□□ 0.36
TRIM11-205ENST00000602308 MYH8P13535 1937 aa17.27■□□□□ 0.35
TRIM11-205ENST00000602308 EFCAB14O75071 495 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 PDGFBP01127 241 aaPredicted RBP17.26■□□□□ 0.35
TRIM11-205ENST00000602308 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.354e-8■■■■□ 25.5
TRIM11-205ENST00000602308 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
TRIM11-205ENST00000602308 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 NKD2Q969F2 451 aaPredicted RBP17.26■□□□□ 0.35
TRIM11-205ENST00000602308 RMDN1Q96DB5 314 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 WDR87Q6ZQQ6 2873 aa17.26■□□□□ 0.35
TRIM11-205ENST00000602308 BAHCC1Q9P281 2608 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms