RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CHD1LQ86WJ1 897 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 CLEC4DQ8WXI8 215 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 COL25A1Q9BXS0 654 aaPredicted RBP15.47■□□□□ 0.07
RPS28-204ENST00000602140 RNF41Q9H4P4 317 aaPredicted RBP15.47■□□□□ 0.07
RPS28-204ENST00000602140 NEDD4P46934 1319 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 SNHG28P0DPA3 235 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 PSMC6P62333 389 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 GRIN2CQ14957 1233 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 DUSP28Q4G0W2 176 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 RNF207Q6ZRF8 634 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 ZNF365Q70YC5 407 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
RPS28-204ENST00000602140 ESR2Q92731 530 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
RPS28-204ENST00000602140 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 TRPV6Q9H1D0 765 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
RPS28-204ENST00000602140 CUL9Q8IWT3 2517 aa15.46■□□□□ 0.06
RPS28-204ENST00000602140 UMODL1Q5DID0 1318 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 PRUNE2Q8WUY3 3088 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 LOC102724159A0A0B4J2E5 919 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 GRXCR1A8MXD5 290 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 ZNF213O14771 459 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 B4GALT4O60513 344 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 IGHDP01880 384 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 PWP2Q15269 919 aaKnown RBP15.45■□□□□ 0.06
RPS28-204ENST00000602140 RASIP1Q5U651 963 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 PSRC1Q6PGN9 363 aaPredicted RBP15.45■□□□□ 0.06
RPS28-204ENST00000602140 CWC27Q6UX04 472 aaKnown RBP15.45■□□□□ 0.06
RPS28-204ENST00000602140 TIFAQ96CG3 184 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 SEZ6LQ9BYH1 1024 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 OSBPL3Q9H4L5 887 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 ZNF576Q9H609 170 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 IL23AQ9NPF7 189 aa15.45■□□□□ 0.06
RPS28-204ENST00000602140 GOLGA8HP0CJ92 632 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 PBX2P40425 430 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 RPS6P62753 249 aaKnown RBP15.44■□□□□ 0.06
RPS28-204ENST00000602140 NUCB1Q02818 461 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 GPATCH4Q5T3I0 446 aaKnown RBP15.44■□□□□ 0.06
RPS28-204ENST00000602140 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 DIAPH3Q9NSV4 1193 aa15.44■□□□□ 0.06
RPS28-204ENST00000602140 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
RPS28-204ENST00000602140 KDM4AO75164 1064 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 FGBP02675 491 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 MYL3P08590 195 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 CCL23P55773 120 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 PDE4DQ08499 809 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 USH1GQ495M9 461 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 IQCA1Q86XH1 822 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 DGKHQ86XP1 1220 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 OR6J1Q8NGC5 347 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 HERVK_113Q902F9 699 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 NOC4LQ9BVI4 516 aaKnown RBP15.43■□□□□ 0.06
RPS28-204ENST00000602140 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
RPS28-204ENST00000602140 VCANP13611 3396 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 B4E1Z4 1266 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 EDNRBP24530 442 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 CPT1AP50416 773 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 PURAQ00577 322 aaKnown RBP15.42■□□□□ 0.06
RPS28-204ENST00000602140 PPP2R5BQ15173 497 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 PNMA1Q8ND90 353 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 DNERQ8NFT8 737 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 MPHOSPH6Q99547 160 aaKnown RBP15.42■□□□□ 0.06
RPS28-204ENST00000602140 WNT8AQ9H1J5 351 aa15.42■□□□□ 0.06
RPS28-204ENST00000602140 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
RPS28-204ENST00000602140 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
RPS28-204ENST00000602140 CXXC1Q9P0U4 656 aaPredicted RBP15.42■□□□□ 0.06
RPS28-204ENST00000602140 HIP1O00291 1037 aa15.41■□□□□ 0.06
RPS28-204ENST00000602140 CCDC178Q5BJE1 867 aa15.41■□□□□ 0.06
RPS28-204ENST00000602140 OTOP2Q7RTS6 562 aa15.41■□□□□ 0.06
RPS28-204ENST00000602140 SCFD2Q8WU76 684 aa15.41■□□□□ 0.06
RPS28-204ENST00000602140 MTIF3Q9H2K0 278 aaKnown RBP15.41■□□□□ 0.06
RPS28-204ENST00000602140 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
RPS28-204ENST00000602140 TRMT13Q9NUP7 481 aaKnown RBP15.41■□□□□ 0.06
RPS28-204ENST00000602140 B4DLN1 442 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 NKRFO15226 690 aaKnown RBP eCLIP15.4■□□□□ 0.06
RPS28-204ENST00000602140 SUPT20HL2P0C7V6 817 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 CYP2C9P11712 490 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 NT5C2P49902 561 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 MRPL12P52815 198 aaKnown RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 BRDTQ58F21 947 aaPredicted RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 ADGRF4Q8IZF3 695 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 TBC1D5Q92609 795 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 ANKS1AQ92625 1134 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 COPS5Q92905 334 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 SCLYQ96I15 445 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 ZSCAN10Q96SZ4 725 aaPredicted RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 MTG1Q9BT17 334 aaPredicted RBP15.4■□□□□ 0.06
RPS28-204ENST00000602140 DSCC1Q9BVC3 393 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms