RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 H7C1W4 665 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 C6orf89Q6UWU4 347 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 FAM43BQ6ZT52 329 aaPredicted RBP17.81■□□□□ 0.44
SYDE1-204ENST00000600440 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 CCDC170Q8IYT3 715 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 HELBQ8NG08 1087 aaPredicted RBP17.81■□□□□ 0.44
SYDE1-204ENST00000600440 MTMR8Q96EF0 704 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 CNOT6LQ96LI5 555 aaKnown RBP17.81■□□□□ 0.44
SYDE1-204ENST00000600440 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 PDE6AP16499 860 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 KCNB1Q14721 858 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 GKAP1Q5VSY0 366 aaPredicted RBP17.81■□□□□ 0.44
SYDE1-204ENST00000600440 IFNL3Q8IZI9 196 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 ZNF507Q8TCN5 953 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 PARD3BQ8TEW8 1205 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 CALR3Q96L12 384 aaKnown RBP17.81■□□□□ 0.44
SYDE1-204ENST00000600440 YIPF3Q9GZM5 350 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 RMND1Q9NWS8 449 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 ARHGAP20Q9P2F6 1191 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
SYDE1-204ENST00000600440 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 EPHB6O15197 1021 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 LIFRP42702 1097 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
SYDE1-204ENST00000600440 EHHADHQ08426 723 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 HLFQ16534 295 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 MEA1Q16626 185 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 ARFGAP2Q8N6H7 521 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 HPS3Q969F9 1004 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 TLR10Q9BXR5 811 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 EPB41L4AQ9HCS5 686 aaPredicted RBP17.8■□□□□ 0.44
SYDE1-204ENST00000600440 PLEKHA8P1O95397 391 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 PDXDC2PQ6P474 469 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 MAGEB6Q8N7X4 407 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 ARMC2Q8NEN0 867 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 FAM167BQ9BTA0 163 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 PDS5AQ29RF7 1337 aaKnown RBP17.8■□□□□ 0.44
SYDE1-204ENST00000600440 AP1G2O75843 785 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 KIF4AO95239 1232 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 ATP6V1G2O95670 118 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 MAEAQ7L5Y9 396 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 RAPGEF5Q92565 580 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 AXIN2Q9Y2T1 843 aa17.8■□□□□ 0.44
SYDE1-204ENST00000600440 RICTORQ6R327 1708 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 A0A1W2PQC6 194 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 SRGNP10124 158 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 SLC1A4P43007 532 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 CEBPAP49715 358 aaPredicted RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 MAGOHP61326 146 aaKnown RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 ADSSL1Q8N142 457 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 LMBR1Q8WVP7 490 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 GOLPH3Q9H4A6 298 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 NLRC4Q9NPP4 1024 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 SPATS2LQ9NUQ6 558 aaKnown RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 CNOT8Q9UFF9 292 aaKnown RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 RAD51CO43502 376 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 RTN2O75298 545 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 IRX1P78414 480 aaPredicted RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 MAP2K1Q02750 393 aaPredicted RBP17.79■□□□□ 0.44
SYDE1-204ENST00000600440 AP1ARQ63HQ0 302 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 PLCD4Q9BRC7 762 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 TRIM31Q9BZY9 425 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 CNNM1Q9NRU3 951 aa17.79■□□□□ 0.44
SYDE1-204ENST00000600440 SNAP23O00161 211 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 EEF1GP26641 437 aaKnown RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 ELF3P78545 371 aaPredicted RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 PURBQ96QR8 312 aaKnown RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 HSD17B3P37058 310 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 ZKSCAN8Q15776 578 aaPredicted RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 KRT71Q3SY84 523 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 NOX5Q96PH1 765 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 ANP32DO95626 131 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 PHKA1P46020 1223 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 NLRP5P59047 1200 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 GLE1Q53GS7 698 aaKnown RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 CACNA2D4Q7Z3S7 1137 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 LRP10Q7Z4F1 713 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 CCDC63Q8NA47 563 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 ZNF483Q8TF39 744 aaPredicted RBP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 CUL5Q93034 780 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 NLRP3Q96P20 1036 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 SELENOSQ9BQE4 189 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.78■□□□□ 0.44
SYDE1-204ENST00000600440 TMBIM4Q9HC24 238 aa17.78■□□□□ 0.44
SYDE1-204ENST00000600440 TRAPPC3O43617 180 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms