RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 POLA2Q14181 598 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
SCN8A-208ENST00000599343 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
SCN8A-208ENST00000599343 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.9□□□□□ -0.34
SCN8A-208ENST00000599343 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 A6NJR5 290 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 RBL2Q08999 1139 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 ZNF277Q9NRM2 450 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-208ENST00000599343 KLRF2D3W0D1 207 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 APOEP02649 317 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 HOXB7P09629 217 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 FAM26FQ5R3K3 315 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 PLA2G4DQ86XP0 818 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 EPB41L5Q9HCM4 733 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 ANLNQ9NQW6 1124 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 RNF8O76064 485 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 HSPD1P10809 573 aaKnown RBP12.9□□□□□ -0.34
SCN8A-208ENST00000599343 CTSWP56202 376 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 NUB1Q9Y5A7 615 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
SCN8A-208ENST00000599343 HP1BP3Q5SSJ5 553 aaPredicted RBP12.9□□□□□ -0.35
SCN8A-208ENST00000599343 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.35
SCN8A-208ENST00000599343 MYLK4Q86YV6 388 aaPredicted RBP12.9□□□□□ -0.35
SCN8A-208ENST00000599343 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.35
SCN8A-208ENST00000599343 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.35
SCN8A-208ENST00000599343 APOL6Q9BWW8 343 aa12.9□□□□□ -0.35
SCN8A-208ENST00000599343 C19orf44Q9H6X5 657 aa12.9□□□□□ -0.35
SCN8A-208ENST00000599343 RRP15Q9Y3B9 282 aaKnown RBP12.9□□□□□ -0.35
SCN8A-208ENST00000599343 ADCY9O60503 1353 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 S100BP04271 92 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-208ENST00000599343 BCAMP50895 628 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 SCNN1DP51172 638 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
SCN8A-208ENST00000599343 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 TRPA1O75762 1119 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
SCN8A-208ENST00000599343 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 GNGT2O14610 69 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 CXCR5P32302 372 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-208ENST00000599343 SCRN1Q12765 414 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 A0A087WWV3 80 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 SLC4A1P02730 911 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 TMTC3Q6ZXV5 915 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 FBXO11Q86XK2 927 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 TUBGCP2Q9BSJ2 902 aa12.89□□□□□ -0.35
SCN8A-208ENST00000599343 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ADPGKQ9BRR6 497 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 KIAA1024Q9UPX6 916 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 HEXIM1O94992 359 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PLTPP55058 493 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 APBA1Q02410 837 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 METTL14Q9HCE5 456 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 LARSQ9P2J5 1176 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PFDN6O15212 129 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 LMNB1P20700 586 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 LCA5Q86VQ0 697 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 NIM1KQ8IY84 436 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 GDAP1Q8TB36 358 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 ANAPC5Q9UJX4 755 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 DYNLT1P63172 113 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 UBXN2AP68543 259 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 LRRC41Q15345 812 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 MRPL11Q9Y3B7 192 aaKnown RBP12.88□□□□□ -0.35
SCN8A-208ENST00000599343 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 PDE6AP16499 860 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 KCNA6P17658 529 aa12.88□□□□□ -0.35
SCN8A-208ENST00000599343 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms