RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 EEF1DP3Q658K8 133 aa9.45□□□□□ -0.9
LINC00343-208ENST00000599264 PTCHD1Q96NR3 888 aa9.45□□□□□ -0.9
LINC00343-208ENST00000599264 KLHL25Q9H0H3 589 aa9.45□□□□□ -0.9
LINC00343-208ENST00000599264 CEBPAP49715 358 aaPredicted RBP9.44□□□□□ -0.9
LINC00343-208ENST00000599264 CASP7P55210 303 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 CORO7P57737 925 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 CBX2Q14781 532 aaPredicted RBP9.44□□□□□ -0.9
LINC00343-208ENST00000599264 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 ADCY4Q8NFM4 1077 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 SHDQ96IW2 340 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 CNTD2Q9H8S5 307 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 PCDHB10Q9UN67 800 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 RUSC2Q8N2Y8 1516 aa9.44□□□□□ -0.9
LINC00343-208ENST00000599264 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 GLI2P10070 1586 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 EPHX1P07099 455 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 MVKQ03426 396 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 MZB1Q8WU39 189 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 PDLIM7Q9NR12 457 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 SUGT1Q9Y2Z0 365 aa9.43□□□□□ -0.9
LINC00343-208ENST00000599264 UNCXA6NJT0 531 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 NAT2P11245 290 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 IFNGR1P15260 489 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 L1CAMP32004 1257 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 LCE1DQ5T752 114 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 ACBD3Q9H3P7 528 aa9.42□□□□□ -0.9
LINC00343-208ENST00000599264 PI3P19957 117 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 EPHB3P54753 998 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 AMPD2Q01433 879 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 BICRALQ6AI39 1079 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 ZC3H14Q6PJT7 736 aaKnown RBP9.41□□□□□ -0.9
LINC00343-208ENST00000599264 VHLLQ6RSH7 139 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 PAQR3Q6TCH7 311 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 RPTNQ6XPR3 784 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
LINC00343-208ENST00000599264 FGD4Q96M96 766 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
LINC00343-208ENST00000599264 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 AURKAO14965 403 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 CYBBP04839 570 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 SEPHS1P49903 392 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 CDR1P51861 262 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 GRB10Q13322 594 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 SSPNQ14714 243 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 KIAA1211LQ6NV74 962 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 LDHDQ86WU2 507 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
LINC00343-208ENST00000599264 NLGN2Q8NFZ4 835 aa9.4□□□□□ -0.9
LINC00343-208ENST00000599264 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
LINC00343-208ENST00000599264 TRBV23OR9-2A0A075B6M9 112 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 SRGAP3O43295 1099 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 ARHGEF39Q8N4T4 335 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 CAPN10Q9HC96 672 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 CGGBP1Q9UFW8 167 aaPredicted RBP9.39□□□□□ -0.91
LINC00343-208ENST00000599264 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
LINC00343-208ENST00000599264 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 STXBP3O00186 592 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 MSL3P1P0C860 447 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 PFKLP17858 780 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 DPY19L1Q2PZI1 675 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 PLEKHN1Q494U1 663 aaPredicted RBP9.38□□□□□ -0.91
LINC00343-208ENST00000599264 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 CABP7Q86V35 215 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 APBA2Q99767 749 aa9.38□□□□□ -0.91
LINC00343-208ENST00000599264 DBR1Q9UK59 544 aaKnown RBP9.38□□□□□ -0.91
LINC00343-208ENST00000599264 CUL7Q14999 1698 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 C2orf71A6NGG8 1288 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
LINC00343-208ENST00000599264 VAMP4O75379 141 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 DBHP09172 617 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 AFF3P51826 1226 aaKnown RBP9.37□□□□□ -0.91
LINC00343-208ENST00000599264 ZNF143P52747 638 aaPredicted RBP9.37□□□□□ -0.91
LINC00343-208ENST00000599264 GNL2Q13823 731 aaKnown RBP9.37□□□□□ -0.91
LINC00343-208ENST00000599264 NCAPHQ15003 741 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 TARBP2Q15633 366 aaKnown RBP9.37□□□□□ -0.91
LINC00343-208ENST00000599264 CNKSR3Q6P9H4 555 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
LINC00343-208ENST00000599264 INHBBP09529 407 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 BMP7P18075 431 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
LINC00343-208ENST00000599264 ZCCHC4Q9H5U6 513 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
LINC00343-208ENST00000599264 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 DISP3Q9P2K9 1392 aa9.36□□□□□ -0.91
LINC00343-208ENST00000599264 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 NOP56O00567 594 aaKnown RBP9.35□□□□□ -0.91
LINC00343-208ENST00000599264 BUB1BO60566 1050 aaPredicted RBP9.35□□□□□ -0.91
LINC00343-208ENST00000599264 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC00343-208ENST00000599264 PAMP19021 973 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 TACR1P25103 407 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
LINC00343-208ENST00000599264 LILRA6Q6PI73 481 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms