RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 TOP1P11387 765 aaKnown RBP13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 CCL23P55773 120 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 HERVK_113Q902F9 699 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 MROH7Q68CQ1 1323 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 BDP1A6H8Y1 2624 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 IGHDP01880 384 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 DUSP28Q4G0W2 176 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 COPS5Q92905 334 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 SCLYQ96I15 445 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 AP5M1Q9H0R1 490 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 TRMT13Q9NUP7 481 aaKnown RBP13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 Q9Y3F1 56 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 LRRC37A2A6NM11 1700 aa13.01□□□□□ -0.33
GRAMD1A-209ENST00000598580 NEDD4P46934 1319 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
GRAMD1A-209ENST00000598580 CABYRO75952 493 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 CYP2C9P11712 490 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 MYOGP15173 224 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 EDNRBP24530 442 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 RABGGTBP53611 331 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 PPP4R3BQ5MIZ7 849 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
GRAMD1A-209ENST00000598580 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
GRAMD1A-209ENST00000598580 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 ARIH2O95376 493 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 FGBP02675 491 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 CALML3P27482 149 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 PURAQ00577 322 aaKnown RBP12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 PLEKHM2Q8IWE5 1019 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 NKX2-4Q9H2Z4 354 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 NCOR1O75376 2440 aa12.99□□□□□ -0.33
GRAMD1A-209ENST00000598580 ZMYM6O95789 1325 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 SDSP20132 328 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 TTLL4Q14679 1199 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 CTAGE1Q96RT6 745 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 IL25Q9H293 177 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 COL20A1Q9P218 1284 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
GRAMD1A-209ENST00000598580 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 MYL3P08590 195 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 RILPL2Q969X0 211 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 TTC14Q96N46 770 aa12.97□□□□□ -0.33
GRAMD1A-209ENST00000598580 TNKSO95271 1327 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 WDR19Q8NEZ3 1342 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 A6NJR5 290 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 ZEB2O60315 1214 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 GPNMBQ14956 572 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.33
GRAMD1A-209ENST00000598580 REV3LO60673 3130 aa12.96□□□□□ -0.34
GRAMD1A-209ENST00000598580 TRANK1O15050 2925 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 LOC102724159A0A0B4J2E5 919 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 KDM4AO75164 1064 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 PWP2Q15269 919 aaKnown RBP12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 SLC35G1Q2M3R5 365 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 USH1GQ495M9 461 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 MTG1Q9BT17 334 aaPredicted RBP12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
GRAMD1A-209ENST00000598580 EPOPA6NHQ4 379 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 RFXAPO00287 272 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 OPLAHO14841 1288 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 NUCB1Q02818 461 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 PDE4DQ08499 809 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 TCTN1Q2MV58 587 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms