RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 STARD7Q9NQZ5 370 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 E7EWF7 191 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 ITGB8P26012 769 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 CST5P28325 142 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-203ENST00000598359 NT5C2P49902 561 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
SCAF1-203ENST00000598359 TRDNQ13061 729 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 QRICH1Q2TAL8 776 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 ASPRV1Q53RT3 343 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 BADQ92934 168 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 VTI1AQ96AJ9 217 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 SPC25Q9HBM1 224 aa16.07■□□□□ 0.16
SCAF1-203ENST00000598359 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
SCAF1-203ENST00000598359 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
SCAF1-203ENST00000598359 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
SCAF1-203ENST00000598359 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
SCAF1-203ENST00000598359 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 TLK2Q86UE8 772 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SCAF1-203ENST00000598359 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
SCAF1-203ENST00000598359 CLTBP09497 229 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 ANTXR2P58335 489 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
SCAF1-203ENST00000598359 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
SCAF1-203ENST00000598359 PCSK9Q8NBP7 692 aaKnown RBP16.05■□□□□ 0.16
SCAF1-203ENST00000598359 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
SCAF1-203ENST00000598359 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
SCAF1-203ENST00000598359 ABCB11O95342 1321 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 PDE4DQ08499 809 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 FAAP100Q0VG06 881 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
SCAF1-203ENST00000598359 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 C9orf50Q5SZB4 431 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 IQSEC1Q6DN90 963 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
SCAF1-203ENST00000598359 FBXO11Q86XK2 927 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 NCOA7Q8NI08 942 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 ESYT1Q9BSJ8 1104 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
SCAF1-203ENST00000598359 TMEM39AQ9NV64 488 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 COL20A1Q9P218 1284 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
SCAF1-203ENST00000598359 ELP1O95163 1332 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 PPP1R11O60927 126 aaPredicted RBP16.03■□□□□ 0.16
SCAF1-203ENST00000598359 WTAPQ15007 396 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 SHHQ15465 462 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 ANKRD33Q7Z3H0 272 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
SCAF1-203ENST00000598359 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
SCAF1-203ENST00000598359 PALM3A6NDB9 673 aaPredicted RBP16.02■□□□□ 0.16
SCAF1-203ENST00000598359 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 RAG1P15918 1043 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 CDK7P50613 346 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 EPHB4P54760 987 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 PSMC6P62333 389 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 NKX3-2P78367 333 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 GRM4Q14833 912 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 HOMER1Q86YM7 354 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 MB21D2Q8IYB1 491 aaPredicted RBP16.02■□□□□ 0.16
SCAF1-203ENST00000598359 SYTL5Q8TDW5 730 aaPredicted RBP16.02■□□□□ 0.16
SCAF1-203ENST00000598359 COPS5Q92905 334 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 PRDM6Q9NQX0 595 aa16.02■□□□□ 0.16
SCAF1-203ENST00000598359 ERICH2A1L162 156 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 ARVCFO00192 962 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 OPLAHO14841 1288 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 EDNRBP24530 442 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 RGS22Q8NE09 1264 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 DNERQ8NFT8 737 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 IGDCC4Q8TDY8 1250 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 PPP1R13LQ8WUF5 828 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 ANO2Q9NQ90 1003 aa16.01■□□□□ 0.15
SCAF1-203ENST00000598359 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
SCAF1-203ENST00000598359 GRIN2DO15399 1336 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
SCAF1-203ENST00000598359 SLC27A2O14975 620 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 ARIH2O95376 493 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 CFBP00751 764 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 TROAPQ12815 778 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms