RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TLR3O15455 904 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 PPIGQ13427 754 aaKnown RBP eCLIP14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 GRIN2CQ14957 1233 aa14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 PPP1R13LQ8WUF5 828 aa14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
SOX2-OT-228ENST00000597828 KAT6AQ92794 2004 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 PTPDC1A2A3K4 754 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 B4GALT4O60513 344 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 ITGA7Q13683 1181 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 AKNAD1Q5T1N1 836 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 MORC4Q8TE76 937 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 CLEC4DQ8WXI8 215 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 PBX4Q9BYU1 374 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 VTA1Q9NP79 307 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 CHD9Q3L8U1 2897 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 MICAL3Q7RTP6 2002 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
SOX2-OT-228ENST00000597828 TMEM265A0A087WTH1 108 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 GOLGA8HP0CJ92 632 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 CALML3P27482 149 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 CCL23P55773 120 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 ZNF543Q08ER8 600 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 IQSEC1Q6DN90 963 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 SMC5Q8IY18 1101 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 TIFAQ96CG3 184 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 WNT8AQ9H1J5 351 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 HIPK3Q9H422 1215 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 NLRC5Q86WI3 1866 aa14.24□□□□□ -0.13
SOX2-OT-228ENST00000597828 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 SIP14410 1827 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 IGHDP01880 384 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 SDSP20132 328 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 USH1GQ495M9 461 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 PSRC1Q6PGN9 363 aaPredicted RBP14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 IL23AQ9NPF7 189 aa14.23□□□□□ -0.13
SOX2-OT-228ENST00000597828 ATG2AQ2TAZ0 1938 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 RPS6P62753 249 aaKnown RBP14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 DUSP28Q4G0W2 176 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 CWC27Q6UX04 472 aaKnown RBP14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 RNF207Q6ZRF8 634 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 OR6J1Q8NGC5 347 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 COPS5Q92905 334 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 VWCEQ96DN2 955 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 SCLYQ96I15 445 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 UBA5Q9GZZ9 404 aa14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
SOX2-OT-228ENST00000597828 WDR19Q8NEZ3 1342 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 B4E1Z4 1266 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 ZEB2O60315 1214 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 CABYRO75952 493 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 MYL3P08590 195 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 PURAQ00577 322 aaKnown RBP14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 OTOP2Q7RTS6 562 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 IL25Q9H293 177 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 PRDM6Q9NQX0 595 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 TRMT13Q9NUP7 481 aaKnown RBP14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 Q9Y3F1 56 aa14.21□□□□□ -0.13
SOX2-OT-228ENST00000597828 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 KDM4AO75164 1064 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 ARIH2O95376 493 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 CYP2C9P11712 490 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 PDE4DQ08499 809 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 TBC1D5Q92609 795 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 NKX2-4Q9H2Z4 354 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 PRDM12Q9H4Q4 367 aa14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 YBX2Q9Y2T7 364 aaKnown RBP14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 PRRC2BQ5JSZ5 2229 aaKnown RBP14.2□□□□□ -0.14
SOX2-OT-228ENST00000597828 TNKSO95271 1327 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 ZNF213O14771 459 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 PCP11498 1178 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 EDNRBP24530 442 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 RABGGTBP53611 331 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 NUCB1Q02818 461 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
SOX2-OT-228ENST00000597828 PPM1EQ8WY54 764 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms