RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 TRIP12Q14669 1992 aaPredicted RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 TOP1P11387 765 aaKnown RBP12.59□□□□□ -0.39
USE1-203ENST00000593597 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 PPP1R13LQ8WUF5 828 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 VTI1AQ96AJ9 217 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 TIFAQ96CG3 184 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
USE1-203ENST00000593597 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 CPVLQ9H3G5 476 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 ZNF576Q9H609 170 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
USE1-203ENST00000593597 COL4A4P53420 1690 aaPredicted RBP12.58□□□□□ -0.4
USE1-203ENST00000593597 RBM47A0AV96 593 aaKnown RBP12.58□□□□□ -0.4
USE1-203ENST00000593597 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 EDNRBP24530 442 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 CCL23P55773 120 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 ADGRE1Q14246 886 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 IQSEC1Q6DN90 963 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
USE1-203ENST00000593597 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
USE1-203ENST00000593597 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.4
USE1-203ENST00000593597 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
USE1-203ENST00000593597 ARIH2O95376 493 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
USE1-203ENST00000593597 SMC5Q8IY18 1101 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 COPS5Q92905 334 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 SCLYQ96I15 445 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 IL25Q9H293 177 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
USE1-203ENST00000593597 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
USE1-203ENST00000593597 Q9Y3F1 56 aa12.57□□□□□ -0.4
USE1-203ENST00000593597 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 CABYRO75952 493 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 IGHDP01880 384 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 SDSP20132 328 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 RPS6P62753 249 aaKnown RBP12.56□□□□□ -0.4
USE1-203ENST00000593597 PURAQ00577 322 aaKnown RBP12.56□□□□□ -0.4
USE1-203ENST00000593597 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 NKX2-4Q9H2Z4 354 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 WDR19Q8NEZ3 1342 aa12.56□□□□□ -0.4
USE1-203ENST00000593597 CYP2C9P11712 490 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 MYOGP15173 224 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 CALML3P27482 149 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 UBA5Q9GZZ9 404 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 DOCK5Q9H7D0 1870 aa12.55□□□□□ -0.4
USE1-203ENST00000593597 RABGGTBP53611 331 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 RNF207Q6ZRF8 634 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 TNKSO95271 1327 aa12.54□□□□□ -0.4
USE1-203ENST00000593597 NCOR1O75376 2440 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
USE1-203ENST00000593597 PRRC2BQ5JSZ5 2229 aaKnown RBP12.53□□□□□ -0.4
USE1-203ENST00000593597 TCF20Q9UGU0 1960 aaKnown RBP12.53□□□□□ -0.4
USE1-203ENST00000593597 LOC102724159A0A0B4J2E5 919 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 FGBP02675 491 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 MYL3P08590 195 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 PWP2Q15269 919 aaKnown RBP12.53□□□□□ -0.4
USE1-203ENST00000593597 USH1GQ495M9 461 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 TICAM2Q86XR7 235 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 TTC14Q96N46 770 aa12.53□□□□□ -0.4
USE1-203ENST00000593597 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
USE1-203ENST00000593597 A6NJR5 290 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 OPLAHO14841 1288 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 ZEB2O60315 1214 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 KDM4AO75164 1064 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 NUCB1Q02818 461 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms