RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 ZNF214Q9UL59 606 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 SPTLC2O15270 562 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 PPP6R2O75170 966 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 BMP15O95972 392 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 GTF2A2P52657 109 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 INF2Q27J81 1249 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 CTDP1Q9Y5B0 961 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-213ENST00000593267 TRAK2O60296 914 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 SLC34A2O95436 690 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 MBD3O95983 291 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 CETPP11597 493 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 RGS19P49795 217 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 HSD17B4P51659 736 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 KLHL40Q2TBA0 621 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 NEK8Q86SG6 692 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 CPXCR1Q8N123 301 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 TBCKQ8TEA7 893 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 ASCC2Q9H1I8 757 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 SLC45A1Q9Y2W3 748 aa13.15□□□□□ -0.3
CACNA1A-213ENST00000593267 EDIL3O43854 480 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 ALAS1P13196 640 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 ME1P48163 572 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 IRX3P78415 501 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 ATP2C1P98194 919 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 MAP3K20Q9NYL2 800 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-213ENST00000593267 LCTP09848 1927 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 NFIBO00712 420 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 CFBP00751 764 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 OSBPP22059 807 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 HERVK_113P62684 666 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 ZNF174Q15697 407 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 CCL15Q16663 113 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 BRI3BPQ8WY22 251 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 MAF1Q9H063 256 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
CACNA1A-213ENST00000593267 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 CNMDO75829 334 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 PTPREP23469 700 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 MCM7P33993 719 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 SREBF1P36956 1147 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 STAT3P40763 770 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 ZNF157P51786 506 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 MOXD1Q6UVY6 613 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 RIOX2Q8IUF8 465 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms