RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 TMEM199Q8N511 208 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 CLEC4DQ8WXI8 215 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 CDX2Q99626 313 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-243ENST00000593128 WDR11Q9BZH6 1224 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 SEMA6BQ9H3T3 888 aa21.02■□□□□ 0.96
CIRBP-243ENST00000593128 CABYRO75952 493 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 ACRP10323 421 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 CSF2RAP15509 400 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 CYP2C18P33260 490 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-243ENST00000593128 GPATCH4Q5T3I0 446 aaKnown RBP21.01■□□□□ 0.95
CIRBP-243ENST00000593128 DGKHQ86XP1 1220 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 MPHOSPH6Q99547 160 aaKnown RBP21.01■□□□□ 0.95
CIRBP-243ENST00000593128 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.01■□□□□ 0.956e-8■■□□□ 11.6
CIRBP-243ENST00000593128 PNMA2Q9UL42 364 aa21.01■□□□□ 0.95
CIRBP-243ENST00000593128 MYL3P08590 195 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 SNHG28P0DPA3 235 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 RPS6P62753 249 aaKnown RBP21■□□□□ 0.95
CIRBP-243ENST00000593128 CCDC178Q5BJE1 867 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 OR6J1Q8NGC5 347 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 MYLIPQ8WY64 445 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 ZSCAN10Q96SZ4 725 aaPredicted RBP21■□□□□ 0.95
CIRBP-243ENST00000593128 VAT1LQ9HCJ6 419 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
CIRBP-243ENST00000593128 NKX3-2P78367 333 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 CDC37Q16543 378 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-243ENST00000593128 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 MORC4Q8TE76 937 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 UBAC1Q9BSL1 405 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 DSCC1Q9BVC3 393 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 TRPV6Q9H1D0 765 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 TTYH1Q9H313 450 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-243ENST00000593128 HIPK3Q9H422 1215 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 MYH6P13533 1939 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 TNKSO95271 1327 aa20.99■□□□□ 0.95
CIRBP-243ENST00000593128 ENAHQ8N8S7 591 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-243ENST00000593128 KRT23Q9C075 422 aa20.98■□□□□ 0.95
CIRBP-243ENST00000593128 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-243ENST00000593128 ZSWIM5Q9P217 1185 aa20.98■□□□□ 0.95
CIRBP-243ENST00000593128 Q9Y3F1 56 aa20.98■□□□□ 0.95
CIRBP-243ENST00000593128 GRIN2DO15399 1336 aa20.98■□□□□ 0.95
CIRBP-243ENST00000593128 WDR19Q8NEZ3 1342 aa20.98■□□□□ 0.95
CIRBP-243ENST00000593128 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-243ENST00000593128 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-243ENST00000593128 CD4P01730 458 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 CCL23P55773 120 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 CHMP4BP1P59074 171 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 PPP2R5BQ15173 497 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 TMEM240Q5SV17 173 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 ZNF365Q70YC5 407 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 UMODL1Q5DID0 1318 aa20.97■□□□□ 0.95
CIRBP-243ENST00000593128 B4GALT4O60513 344 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
CIRBP-243ENST00000593128 FOSL2P15408 326 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 DNAJB2P25686 324 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 PDE4AP27815 886 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 CPT1AP50416 773 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 ASPRV1Q53RT3 343 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 FAM47CQ5HY64 1035 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 C16orf59Q7L2K0 433 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 SLC43A3Q8NBI5 491 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 PPP1R13LQ8WUF5 828 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 COPS5Q92905 334 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 IL25Q9H293 177 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 CNNM2Q9H8M5 875 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 POLR3EQ9NVU0 708 aa20.96■□□□□ 0.95
CIRBP-243ENST00000593128 GRXCR1A8MXD5 290 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 B4DLN1 442 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 MRPL12P52815 198 aaKnown RBP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 BRDTQ58F21 947 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 IFIT1BQ5T764 474 aaKnown RBP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 TTC22Q5TAA0 569 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 PSRC1Q6PGN9 363 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 MAFAQ8NHW3 353 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-243ENST00000593128 TBC1D5Q92609 795 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 ABCB11O95342 1321 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 RAD50Q92878 1312 aa20.95■□□□□ 0.94
CIRBP-243ENST00000593128 LOC102724159A0A0B4J2E5 919 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 TXNP10599 105 aaKnown RBP20.94■□□□□ 0.94
CIRBP-243ENST00000593128 GSPT1P15170 499 aaKnown RBP20.94■□□□□ 0.94
CIRBP-243ENST00000593128 NT5C2P49902 561 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 PWP2Q15269 919 aaKnown RBP20.94■□□□□ 0.94
CIRBP-243ENST00000593128 QRICH1Q2TAL8 776 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 DNERQ8NFT8 737 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 SCFD2Q8WU76 684 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 TIFAQ96CG3 184 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 IL23AQ9NPF7 189 aa20.94■□□□□ 0.94
CIRBP-243ENST00000593128 TRMT13Q9NUP7 481 aaKnown RBP20.94■□□□□ 0.94
CIRBP-243ENST00000593128 EYSQ5T1H1 3165 aa20.93■□□□□ 0.94
CIRBP-243ENST00000593128 RBM47A0AV96 593 aaKnown RBP20.93■□□□□ 0.94
CIRBP-243ENST00000593128 PBX2P40425 430 aa20.93■□□□□ 0.94
CIRBP-243ENST00000593128 PURAQ00577 322 aaKnown RBP20.93■□□□□ 0.94
CIRBP-243ENST00000593128 SEPT14Q6ZU15 432 aa20.93■□□□□ 0.94
CIRBP-243ENST00000593128 OTOP2Q7RTS6 562 aa20.93■□□□□ 0.94
CIRBP-243ENST00000593128 FBXO11Q86XK2 927 aa20.93■□□□□ 0.94
CIRBP-243ENST00000593128 ANKS1AQ92625 1134 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms