RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 ADAMTS5Q9UNA0 930 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 RTP1P59025 263 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
DDX39A-219ENST00000592927 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 SCRN1Q12765 414 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 STK3Q13188 491 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 PLS1Q14651 629 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 CPVLQ9H3G5 476 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
DDX39A-219ENST00000592927 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 PEX10O60683 326 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 CNMDO75829 334 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 PDCP20941 246 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 ERVK-9P63128 1117 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 ERVK-24P63145 666 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 CCNA1P78396 465 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
DDX39A-219ENST00000592927 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 ADGRF4Q8IZF3 695 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-219ENST00000592927 SLC38A10Q9HBR0 1119 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-219ENST00000592927 BTBD7Q9P203 1132 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
DDX39A-219ENST00000592927 CDKL5O76039 1030 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
DDX39A-219ENST00000592927 SMARCA1P28370 1054 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 GJB2P29033 226 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 SNAP25P60880 206 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
DDX39A-219ENST00000592927 Q3C1V9 767 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 CCDC174Q6PII3 467 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 CCAR1Q8IX12 1150 aaKnown RBP13.72□□□□□ -0.21
DDX39A-219ENST00000592927 CPXCR1Q8N123 301 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 SPATC1LQ9H0A9 340 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 RANBP17Q9H2T7 1088 aaKnown RBP13.72□□□□□ -0.21
DDX39A-219ENST00000592927 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
DDX39A-219ENST00000592927 CPLX1O14810 134 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 STAT3P40763 770 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 OAZ1P54368 228 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 CCL14Q16627 93 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 TRMT44Q8IYL2 757 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 CMTR1Q8N1G2 835 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 RGS22Q8NE09 1264 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 SPZ1Q9BXG8 430 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
DDX39A-219ENST00000592927 RAVER2Q9HCJ3 691 aaKnown RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-219ENST00000592927 MYH6P13533 1939 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 ATP2A1O14983 1001 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 CYTH3O43739 400 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 ICAM1P05362 532 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 DNAJB2P25686 324 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 CDC27P30260 824 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 COPB2P35606 906 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 CCDC85BQ15834 202 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 CDC37Q16543 378 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 WDR78Q5VTH9 848 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 RIOX2Q8IUF8 465 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 RRP36Q96EU6 259 aaKnown RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 GAS2L1Q99501 681 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 ZNF214Q9UL59 606 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-219ENST00000592927 CCPG1Q9ULG6 757 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
DDX39A-219ENST00000592927 RLFQ13129 1914 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 ZBTB5O15062 677 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 SLC25A27O95847 323 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 MAPK4P31152 587 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 QRICH1Q2TAL8 776 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 SOCS4Q8WXH5 440 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms