RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ZNF213O14771 459 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 SNHG28P0DPA3 235 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 ACRP10323 421 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 CALML3P27482 149 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 DUSP28Q4G0W2 176 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 SLC30A10Q6XR72 485 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 ESR2Q92731 530 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 ZKSCAN3Q9BRR0 538 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 OSBPL3Q9H4L5 887 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 PNMA2Q9UL42 364 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 NEDD4P46934 1319 aa25.57■■□□□ 1.68
DDX39A-215ENST00000590696 LOC102724159A0A0B4J2E5 919 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 FOSL2P15408 326 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 PSMC6P62333 389 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 NUCB1Q02818 461 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 PWP2Q15269 919 aaKnown RBP25.56■■□□□ 1.68
DDX39A-215ENST00000590696 RNF207Q6ZRF8 634 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 ZNF365Q70YC5 407 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 SEZ6LQ9BYH1 1024 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 WDR11Q9BZH6 1224 aa25.56■■□□□ 1.68
DDX39A-215ENST00000590696 PSRC1Q6PGN9 363 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-215ENST00000590696 CWC27Q6UX04 472 aaKnown RBP25.55■■□□□ 1.68
DDX39A-215ENST00000590696 HIPK3Q9H422 1215 aa25.55■■□□□ 1.68
DDX39A-215ENST00000590696 EYSQ5T1H1 3165 aa25.55■■□□□ 1.68
DDX39A-215ENST00000590696 GOLGA8HP0CJ92 632 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 RPS6P62753 249 aaKnown RBP25.54■■□□□ 1.68
DDX39A-215ENST00000590696 GRIN2CQ14957 1233 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 GPATCH4Q5T3I0 446 aaKnown RBP25.54■■□□□ 1.68
DDX39A-215ENST00000590696 RASIP1Q5U651 963 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 DGKHQ86XP1 1220 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 COL25A1Q9BXS0 654 aaPredicted RBP25.54■■□□□ 1.68
DDX39A-215ENST00000590696 TRPV6Q9H1D0 765 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 IL23AQ9NPF7 189 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 DIAPH3Q9NSV4 1193 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 UMODL1Q5DID0 1318 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 WDR19Q8NEZ3 1342 aa25.54■■□□□ 1.68
DDX39A-215ENST00000590696 CDH23Q9H251 3354 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 RBM47A0AV96 593 aaKnown RBP25.53■■□□□ 1.68
DDX39A-215ENST00000590696 GRXCR1A8MXD5 290 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 B4GALT4O60513 344 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 EXOC6Q8TAG9 804 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 TIFAQ96CG3 184 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 ZNF576Q9H609 170 aa25.53■■□□□ 1.68
DDX39A-215ENST00000590696 PDE4DQ08499 809 aa25.52■■□□□ 1.68
DDX39A-215ENST00000590696 UBA5Q9GZZ9 404 aa25.52■■□□□ 1.68
DDX39A-215ENST00000590696 CPVLQ9H3G5 476 aa25.52■■□□□ 1.68
DDX39A-215ENST00000590696 POLR3EQ9NVU0 708 aa25.52■■□□□ 1.68
DDX39A-215ENST00000590696 KDM4AO75164 1064 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 PBX2P40425 430 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 CCL23P55773 120 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 USH1GQ495M9 461 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 CCDC178Q5BJE1 867 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 IQCA1Q86XH1 822 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 PNMA1Q8ND90 353 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 DNERQ8NFT8 737 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 OR6J1Q8NGC5 347 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 MPHOSPH6Q99547 160 aaKnown RBP25.51■■□□□ 1.67
DDX39A-215ENST00000590696 NOC4LQ9BVI4 516 aaKnown RBP25.51■■□□□ 1.67
DDX39A-215ENST00000590696 PBX4Q9BYU1 374 aa25.51■■□□□ 1.67
DDX39A-215ENST00000590696 HIP1O00291 1037 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 FGBP02675 491 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 MYL3P08590 195 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 NT5C2P49902 561 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 CPT1AP50416 773 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 HERVK_113Q902F9 699 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
DDX39A-215ENST00000590696 KAT14Q9H8E8 782 aa25.5■■□□□ 1.67
DDX39A-215ENST00000590696 B4E1Z4 1266 aa25.49■■□□□ 1.67
DDX39A-215ENST00000590696 EDNRBP24530 442 aa25.49■■□□□ 1.67
DDX39A-215ENST00000590696 PURAQ00577 322 aaKnown RBP25.49■■□□□ 1.67
DDX39A-215ENST00000590696 LAMA4Q16363 1823 aa25.49■■□□□ 1.67
DDX39A-215ENST00000590696 PPP2R5BQ15173 497 aa25.48■■□□□ 1.67
DDX39A-215ENST00000590696 RGS22Q8NE09 1264 aa25.48■■□□□ 1.67
DDX39A-215ENST00000590696 ANKS1AQ92625 1134 aa25.48■■□□□ 1.67
DDX39A-215ENST00000590696 ZSCAN10Q96SZ4 725 aaPredicted RBP25.48■■□□□ 1.67
DDX39A-215ENST00000590696 DSCC1Q9BVC3 393 aa25.48■■□□□ 1.67
DDX39A-215ENST00000590696 WNT8AQ9H1J5 351 aa25.48■■□□□ 1.67
DDX39A-215ENST00000590696 MTIF3Q9H2K0 278 aaKnown RBP25.48■■□□□ 1.67
DDX39A-215ENST00000590696 GPHNQ9NQX3 736 aaPredicted RBP25.48■■□□□ 1.67
DDX39A-215ENST00000590696 CXXC1Q9P0U4 656 aaPredicted RBP25.48■■□□□ 1.67
DDX39A-215ENST00000590696 B4DLN1 442 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 NKRFO15226 690 aaKnown RBP eCLIP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 MRPL12P52815 198 aaKnown RBP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 CDC37Q16543 378 aaPredicted RBP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 IMMTQ16891 758 aaKnown RBP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 OTOP2Q7RTS6 562 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 ADGRF4Q8IZF3 695 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 SCFD2Q8WU76 684 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 COPS5Q92905 334 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 MTG1Q9BT17 334 aaPredicted RBP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 TRMT13Q9NUP7 481 aaKnown RBP25.47■■□□□ 1.67
DDX39A-215ENST00000590696 ZSWIM5Q9P217 1185 aa25.47■■□□□ 1.67
DDX39A-215ENST00000590696 BRDTQ58F21 947 aaPredicted RBP25.46■■□□□ 1.67
DDX39A-215ENST00000590696 ENAHQ8N8S7 591 aaPredicted RBP25.46■■□□□ 1.67
DDX39A-215ENST00000590696 TBC1D5Q92609 795 aa25.46■■□□□ 1.67
DDX39A-215ENST00000590696 TNKSO95271 1327 aa25.45■■□□□ 1.66
DDX39A-215ENST00000590696 RAD50Q92878 1312 aa25.45■■□□□ 1.66
DDX39A-215ENST00000590696 SUPT20HL2P0C7V6 817 aa25.45■■□□□ 1.66
DDX39A-215ENST00000590696 TXNP10599 105 aaKnown RBP25.45■■□□□ 1.66
DDX39A-215ENST00000590696 CYP2C9P11712 490 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms