RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 PWP2Q15269 919 aaKnown RBP21.67■■□□□ 1.06
MBD1-223ENST00000590215 SLC30A10Q6XR72 485 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 IL27Q8NEV9 243 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 PIBF1Q8WXW3 757 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 TBC1D5Q92609 795 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 LARP6Q9BRS8 491 aaKnown RBP21.67■■□□□ 1.06
MBD1-223ENST00000590215 V9GY48 417 aaPredicted RBP21.67■■□□□ 1.06
MBD1-223ENST00000590215 CYBAP13498 195 aa21.66■■□□□ 1.06
MBD1-223ENST00000590215 CCT2P78371 535 aaKnown RBP21.66■■□□□ 1.06
MBD1-223ENST00000590215 MORC4Q8TE76 937 aa21.66■■□□□ 1.06
MBD1-223ENST00000590215 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
MBD1-223ENST00000590215 NCOA5Q9HCD5 579 aaKnown RBP21.66■■□□□ 1.06
MBD1-223ENST00000590215 HMX1Q9NP08 348 aaPredicted RBP21.66■■□□□ 1.06
MBD1-223ENST00000590215 LCTP09848 1927 aa21.66■■□□□ 1.06
MBD1-223ENST00000590215 hCG_1642624A0A1W2PR95 340 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 PRPF3O43395 683 aaKnown RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 PFKFB2O60825 505 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 SNAI1O95863 264 aaPredicted RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 GJB1P08034 283 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 TRPV1Q8NER1 839 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 DNERQ8NFT8 737 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 SYTL5Q8TDW5 730 aaPredicted RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 TMEM106CQ9BVX2 250 aa21.65■■□□□ 1.06
MBD1-223ENST00000590215 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.65■■□□□ 1.06
MBD1-223ENST00000590215 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 ADD3Q9UEY8 706 aaKnown RBP21.65■■□□□ 1.06
MBD1-223ENST00000590215 ASB14A6NK59 587 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 hCG_1984214I3L0E3 225 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
MBD1-223ENST00000590215 CALML3P27482 149 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 RABEP1Q15276 862 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 ARMCX2Q7L311 632 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 ZNF713Q8N859 430 aaPredicted RBP21.64■■□□□ 1.05
MBD1-223ENST00000590215 COL20A1Q9P218 1284 aa21.64■■□□□ 1.05
MBD1-223ENST00000590215 CFBP00751 764 aa21.63■■□□□ 1.05
MBD1-223ENST00000590215 CAPN2P17655 700 aa21.63■■□□□ 1.05
MBD1-223ENST00000590215 CCND3P30281 292 aaPredicted RBP21.63■■□□□ 1.05
MBD1-223ENST00000590215 SCRN1Q12765 414 aa21.63■■□□□ 1.05
MBD1-223ENST00000590215 PFKFB3Q16875 520 aaPredicted RBP21.63■■□□□ 1.05
MBD1-223ENST00000590215 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
MBD1-223ENST00000590215 RNF26Q9BY78 433 aaPredicted RBP21.63■■□□□ 1.05
MBD1-223ENST00000590215 SLKQ9H2G2 1235 aaPredicted RBP21.63■■□□□ 1.05
MBD1-223ENST00000590215 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.63■■□□□ 1.05
MBD1-223ENST00000590215 RBBP6Q7Z6E9 1792 aaKnown RBP21.62■■□□□ 1.05
MBD1-223ENST00000590215 BRCA2P51587 3418 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 ZNF865P0CJ78 1059 aaPredicted RBP21.62■■□□□ 1.05
MBD1-223ENST00000590215 EDNRBP24530 442 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 GJA8P48165 433 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 ALDH5A1P51649 535 aaPredicted RBP21.62■■□□□ 1.05
MBD1-223ENST00000590215 STK3Q13188 491 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 PKN1Q16512 942 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 ME3Q16798 604 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 TEX2Q8IWB9 1127 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 KATNBL1Q9H079 304 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 CRISPLD2Q9H0B8 497 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 ABHD16BQ9H3Z7 469 aa21.62■■□□□ 1.05
MBD1-223ENST00000590215 POTEFA5A3E0 1075 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 GCOM1H8Y6P7 765 aaPredicted RBP21.61■■□□□ 1.05
MBD1-223ENST00000590215 PIK3CDO00329 1044 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 SGPL1O95470 568 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 POLR2MP0CAP2 368 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 SCG2P13521 617 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 PRAMEF19Q5SWL8 479 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 PPP1R18Q6NYC8 613 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 GPKOWQ92917 476 aaPredicted RBP eCLIP21.61■■□□□ 1.05
MBD1-223ENST00000590215 PHKBQ93100 1093 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 TAAR1Q96RJ0 339 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 BARHL2Q9NY43 387 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 CNPY2Q9Y2B0 182 aa21.61■■□□□ 1.05
MBD1-223ENST00000590215 MCM3APO60318 1980 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 STXBP3O00186 592 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 MEIS2O14770 477 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 CPLX1O14810 134 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 SEPT4O43236 478 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 ACVR2BQ13705 512 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 LHX8Q68G74 356 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 TYW1BQ6NUM6 668 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 CPLX2Q6PUV4 134 aaKnown RBP21.6■■□□□ 1.05
MBD1-223ENST00000590215 NSUN6Q8TEA1 469 aaKnown RBP21.6■■□□□ 1.05
MBD1-223ENST00000590215 U2AF1L4Q8WU68 220 aaKnown RBP21.6■■□□□ 1.05
MBD1-223ENST00000590215 DEFB118Q96PH6 123 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 LIMCH1Q9UPQ0 1083 aa21.6■■□□□ 1.05
MBD1-223ENST00000590215 MSCO60682 206 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 LARGE1O95461 756 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 HOXA13P31271 388 aaPredicted RBP21.59■■□□□ 1.05
MBD1-223ENST00000590215 SOX10P56693 466 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 GTF3C6Q969F1 213 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 IWS1Q96ST2 819 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 RMDN3Q96TC7 470 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 PSTPIP2Q9H939 334 aa21.59■■□□□ 1.05
MBD1-223ENST00000590215 DDX20Q9UHI6 824 aaKnown RBP21.59■■□□□ 1.05
MBD1-223ENST00000590215 B4DLN1 442 aa21.58■■□□□ 1.05
MBD1-223ENST00000590215 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
MBD1-223ENST00000590215 AKAP17AQ02040 695 aaKnown RBP21.58■■□□□ 1.05
MBD1-223ENST00000590215 SSRP1Q08945 709 aaKnown RBP21.58■■□□□ 1.05
MBD1-223ENST00000590215 SHISA4Q96DD7 197 aa21.58■■□□□ 1.05
MBD1-223ENST00000590215 MPHOSPH6Q99547 160 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms