RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 CEP95Q96GE4 821 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 MMS19Q96T76 1030 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 SLC39A2Q9NP94 309 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
ZNF554-203ENST00000590116 LDHCP07864 332 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 KRT83P78385 493 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 RRP36Q96EU6 259 aaKnown RBP23.3■■□□□ 1.32
ZNF554-203ENST00000590116 ZNF287Q9HBT7 754 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 VPS18Q9P253 973 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
ZNF554-203ENST00000590116 ADAM21Q9UKJ8 722 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 GNA11P29992 359 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 TXKP42681 527 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 GRAPQ13588 217 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 MIIPQ5JXC2 388 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 TEX11Q8IYF3 940 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 TXLNBQ8N3L3 684 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 GRAPLQ8TC17 118 aaPredicted RBP23.29■■□□□ 1.32
ZNF554-203ENST00000590116 TRERF1Q96PN7 1200 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 C7orf25Q9BPX7 421 aa23.29■■□□□ 1.32
ZNF554-203ENST00000590116 NOC4LQ9BVI4 516 aaKnown RBP23.29■■□□□ 1.32
ZNF554-203ENST00000590116 NHEJ1Q9H9Q4 299 aaPredicted RBP23.29■■□□□ 1.32
ZNF554-203ENST00000590116 ZNHIT6Q9NWK9 470 aaKnown RBP23.29■■□□□ 1.32
ZNF554-203ENST00000590116 SEC63Q9UGP8 760 aaKnown RBP23.29■■□□□ 1.32
ZNF554-203ENST00000590116 SOGA3Q5TF21 947 aa23.28■■□□□ 1.32
ZNF554-203ENST00000590116 USP17L5A8MUK1 530 aa23.28■■□□□ 1.32
ZNF554-203ENST00000590116 PLEKP08567 350 aaPredicted RBP23.28■■□□□ 1.32
ZNF554-203ENST00000590116 CYLC1P35663 651 aaPredicted RBP23.28■■□□□ 1.32
ZNF554-203ENST00000590116 FAM114A1Q8IWE2 563 aa23.28■■□□□ 1.32
ZNF554-203ENST00000590116 NUP58Q9BVL2 599 aa23.28■■□□□ 1.32
ZNF554-203ENST00000590116 SAR1BQ9Y6B6 198 aa23.28■■□□□ 1.32
ZNF554-203ENST00000590116 MACROD2A1Z1Q3 448 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 ZBTB22O15209 634 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 KRT86O43790 486 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 LMAN1P49257 510 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 GPSM2P81274 684 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 CASP8Q14790 479 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 SEMA6BQ9H3T3 888 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 ZNF185O15231 689 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 EIF3JO75822 258 aaKnown RBP23.27■■□□□ 1.32
ZNF554-203ENST00000590116 IPO7O95373 1038 aaKnown RBP23.27■■□□□ 1.32
ZNF554-203ENST00000590116 ZBED6P86452 979 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 RETREG2Q8NC44 543 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 GBP3Q9H0R5 595 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 BTAF1O14981 1849 aa23.27■■□□□ 1.32
ZNF554-203ENST00000590116 LRRIQ3A6PVS8 624 aaPredicted RBP23.26■■□□□ 1.31
ZNF554-203ENST00000590116 AMPD3Q01432 767 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 DYMQ7RTS9 669 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 NEDD1Q8NHV4 660 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 EPHB6O15197 1021 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 PHACTR2O75167 634 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 ZMYND10O75800 440 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 EIF6P56537 245 aaKnown RBP23.26■■□□□ 1.31
ZNF554-203ENST00000590116 REXO1Q8N1G1 1221 aaKnown RBP23.26■■□□□ 1.31
ZNF554-203ENST00000590116 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
ZNF554-203ENST00000590116 CALML4Q96GE6 196 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 FAN1Q9Y2M0 1017 aa23.26■■□□□ 1.31
ZNF554-203ENST00000590116 SLC37A4O43826 429 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 UFL1O94874 794 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 CNNM4Q6P4Q7 775 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 EHBP1Q8NDI1 1231 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 COA7Q96BR5 231 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 TDP2O95551 362 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 TUBBP07437 444 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 PAPD7Q5XG87 772 aaKnown RBP23.25■■□□□ 1.31
ZNF554-203ENST00000590116 EXOC4Q96A65 974 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 GDAP1L1Q96MZ0 367 aa23.25■■□□□ 1.31
ZNF554-203ENST00000590116 POTEMA6NI47 508 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 ZNF263O14978 683 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 GRB10Q13322 594 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 WDR93Q6P2C0 686 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 GSPT2Q8IYD1 628 aaKnown RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 CCDC170Q8IYT3 715 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 LRRC47Q8N1G4 583 aaKnown RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 CCDC102AQ96A19 550 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 C8orf37Q96NL8 207 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 HINFPQ9BQA5 517 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 MYMKA6NI61 221 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 EIF3CLB5ME19 914 aaKnown RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 ATP2B2Q01814 1243 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 FKBP15Q5T1M5 1219 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 GLIS3Q8NEA6 775 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 EIF3CQ99613 913 aaKnown RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 CD209Q9NNX6 404 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 FAM207AQ9NSI2 230 aaPredicted RBP23.24■■□□□ 1.31
ZNF554-203ENST00000590116 BLOC1S4Q9NUP1 217 aa23.24■■□□□ 1.31
ZNF554-203ENST00000590116 RFC4P35249 363 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 ZNF662Q6ZS27 426 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 GJA10Q969M2 543 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 ERGIC2Q96RQ1 377 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 LRWD1Q9UFC0 647 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 GPR75-ASB3A0A0A6YYF3 556 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 PDE2AO00408 941 aaPredicted RBP23.23■■□□□ 1.31
ZNF554-203ENST00000590116 PPP1R2P41236 205 aa23.23■■□□□ 1.31
ZNF554-203ENST00000590116 USP14P54578 494 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms