RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 NKX2-4Q9H2Z4 354 aa16.44■□□□□ 0.22
SF3A2-205ENST00000590034 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 A0A0D9SFI3 127 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 ZEB2O60315 1214 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 RABGGTBP53611 331 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 ALX1Q15699 326 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 RAB30Q15771 203 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 AKNAD1Q5T1N1 836 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 SLC30A10Q6XR72 485 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 SCLYQ96I15 445 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 TRMT13Q9NUP7 481 aaKnown RBP16.43■□□□□ 0.22
SF3A2-205ENST00000590034 MSRAQ9UJ68 235 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
SF3A2-205ENST00000590034 TRANK1O15050 2925 aa16.42■□□□□ 0.22
SF3A2-205ENST00000590034 FGAP02671 866 aa16.42■□□□□ 0.22
SF3A2-205ENST00000590034 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
SF3A2-205ENST00000590034 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
SF3A2-205ENST00000590034 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
SF3A2-205ENST00000590034 TET1Q8NFU7 2136 aa16.42■□□□□ 0.22
SF3A2-205ENST00000590034 XIRP2A4UGR9 3374 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 RBM47A0AV96 593 aaKnown RBP16.41■□□□□ 0.22
SF3A2-205ENST00000590034 TOP1P11387 765 aaKnown RBP16.41■□□□□ 0.22
SF3A2-205ENST00000590034 CYP2C9P11712 490 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 MYOGP15173 224 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
SF3A2-205ENST00000590034 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
SF3A2-205ENST00000590034 PPP1R13LQ8WUF5 828 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 SEZ6LQ9BYH1 1024 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 MTIF3Q9H2K0 278 aaKnown RBP16.41■□□□□ 0.22
SF3A2-205ENST00000590034 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 TOMM22Q9NS69 142 aa16.41■□□□□ 0.22
SF3A2-205ENST00000590034 PRRC2BQ5JSZ5 2229 aaKnown RBP16.4■□□□□ 0.22
SF3A2-205ENST00000590034 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 PDHBP11177 359 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 PDE1AP54750 535 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 CCDC85BQ15834 202 aaPredicted RBP16.4■□□□□ 0.22
SF3A2-205ENST00000590034 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 THEGQ9P2T0 379 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
SF3A2-205ENST00000590034 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 TNKSO95271 1327 aa16.4■□□□□ 0.22
SF3A2-205ENST00000590034 TRIP12Q14669 1992 aaPredicted RBP16.39■□□□□ 0.21
SF3A2-205ENST00000590034 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 MYL3P08590 195 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
SF3A2-205ENST00000590034 IGFBP4P22692 258 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 CALML3P27482 149 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 HAND2P61296 217 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
SF3A2-205ENST00000590034 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
SF3A2-205ENST00000590034 COPS5Q92905 334 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 SLC4A7Q9Y6M7 1214 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
SF3A2-205ENST00000590034 TCF20Q9UGU0 1960 aaKnown RBP16.38■□□□□ 0.21
SF3A2-205ENST00000590034 TNFRSF10AO00220 468 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 EDNRBP24530 442 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 RPS6P62753 249 aaKnown RBP16.38■□□□□ 0.21
SF3A2-205ENST00000590034 ZNF543Q08ER8 600 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
SF3A2-205ENST00000590034 MCMDC2Q4G0Z9 681 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 RNF207Q6ZRF8 634 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 ASB2Q96Q27 587 aa16.38■□□□□ 0.21
SF3A2-205ENST00000590034 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 ATP2A2P16615 1042 aaKnown RBP16.37■□□□□ 0.21
SF3A2-205ENST00000590034 CPT1AP50416 773 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 PPP2R2DQ66LE6 453 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 DEFB128Q7Z7B8 93 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
SF3A2-205ENST00000590034 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
SF3A2-205ENST00000590034 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 MYH6P13533 1939 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 KIAA1217Q5T5P2 1943 aa16.37■□□□□ 0.21
SF3A2-205ENST00000590034 ARIH2O95376 493 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
SF3A2-205ENST00000590034 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 ADAMTS19Q8TE59 1207 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 NEDD4P46934 1319 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
SF3A2-205ENST00000590034 A6NJR5 290 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 CA3P07451 260 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms