RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 TRIB2Q92519 343 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 IWS1Q96ST2 819 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 RNF208Q9H0X6 261 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 CPVLQ9H3G5 476 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 ABHD16BQ9H3Z7 469 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
APOC1-202ENST00000588750 ZNFX1Q9P2E3 1918 aaKnown RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 ZSWIM8A7E2V4 1837 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 RBBP6Q7Z6E9 1792 aaKnown RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 NFIBO00712 420 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 PFKFB2O60825 505 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 CFBP00751 764 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 PGK2P07205 417 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 ELNP15502 786 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 CAP1Q01518 475 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 MUM1L1Q5H9M0 696 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 ARHGEF16Q5VV41 709 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 HEATR3Q7Z4Q2 680 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 RAB11FIP4Q86YS3 637 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 FAM133AQ8N9E0 248 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 CLEC4DQ8WXI8 215 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 SLC26A6Q9BXS9 759 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 PSTPIP2Q9H939 334 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 SH3GLB2Q9NR46 395 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 KIF3AQ9Y496 699 aa9.43□□□□□ -0.9
APOC1-202ENST00000588750 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
APOC1-202ENST00000588750 PLXNA1Q9UIW2 1896 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 STAM2O75886 525 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
APOC1-202ENST00000588750 GJB1P08034 283 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 CCL5P13501 91 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 SCG2P13521 617 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 AKR1A1P14550 325 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 CNGA1P29973 690 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 CDC27P30260 824 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 ALDH5A1P51649 535 aaPredicted RBP9.42□□□□□ -0.9
APOC1-202ENST00000588750 HSD17B4P51659 736 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 NAPAP54920 295 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
APOC1-202ENST00000588750 GHRHRQ02643 423 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 CACNB2Q08289 660 aaPredicted RBP9.42□□□□□ -0.9
APOC1-202ENST00000588750 PDE4DQ08499 809 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 STK3Q13188 491 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 PFKFB3Q16875 520 aaPredicted RBP9.42□□□□□ -0.9
APOC1-202ENST00000588750 MAP3K21Q5TCX8 1036 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 PIBF1Q8WXW3 757 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 RMDN3Q96TC7 470 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■□ 19.8
APOC1-202ENST00000588750 SPC25Q9HBM1 224 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 C6orf50Q9HD87 102 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 VTA1Q9NP79 307 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 TPCN1Q9ULQ1 816 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 DOCK3Q8IZD9 2030 aa9.42□□□□□ -0.9
APOC1-202ENST00000588750 STK36Q9NRP7 1315 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 ESYT2A0FGR8 921 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 SEPT4O43236 478 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 CYP2C19P33261 490 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 ADCY7P51828 1080 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 HMGN5P82970 282 aaKnown RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 FUT2Q10981 343 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 COL9A3Q14050 684 aaPredicted RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 TRIM29Q14134 588 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 STXBP2Q15833 593 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 CCL14Q16627 93 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 XRRA1Q6P2D8 792 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 KCNV1Q6PIU1 500 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 SYTL5Q8TDW5 730 aaPredicted RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
APOC1-202ENST00000588750 FAM184BQ9ULE4 1060 aa9.41□□□□□ -0.9
APOC1-202ENST00000588750 SMCO2A6NFE2 343 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
APOC1-202ENST00000588750 PPP1R11O60927 126 aaPredicted RBP9.4□□□□□ -0.9
APOC1-202ENST00000588750 SGPL1O95470 568 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 TFRCP02786 760 aaKnown RBP9.4□□□□□ -0.9
APOC1-202ENST00000588750 RARBP10826 455 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 CYBAP13498 195 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 CCND2P30279 289 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 GJA8P48165 433 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 CNTN2Q02246 1040 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 SCRN1Q12765 414 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
APOC1-202ENST00000588750 ACVR2BQ13705 512 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms