RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 CCDC39Q9UFE4 941 aa4.72□□□□□ -1.65
SPIRE1-212ENST00000588236 SFMBT1Q9UHJ3 866 aa4.72□□□□□ -1.65
SPIRE1-212ENST00000588236 ADGRE2Q9UHX3 823 aa4.72□□□□□ -1.65
SPIRE1-212ENST00000588236 SBNO2Q9Y2G9 1366 aa4.72□□□□□ -1.65
SPIRE1-212ENST00000588236 ARAP1Q96P48 1450 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 STXBP3O00186 592 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 NPHS1O60500 1241 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 DNAJC6O75061 913 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 THBDP07204 575 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 RAC2P15153 192 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 CPEP16870 476 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 SPINK2P20155 84 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 FUT4P22083 530 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 HOXA10P31260 410 aaPredicted RBP4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 L1CAMP32004 1257 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 GYS2P54840 703 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 GPR85P60893 370 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 NR0B2Q15466 257 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 KIZQ2M2Z5 673 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 RTP2Q5QGT7 225 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 GALNT18Q6P9A2 607 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 UBE2R2Q712K3 238 aaPredicted RBP4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 ANKLE2Q86XL3 938 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 PPIL6Q8IXY8 311 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 NIM1KQ8IY84 436 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 TMEM145Q8NBT3 493 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 PI4K2BQ8TCG2 481 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 LINC01599Q8WXQ3 324 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 MFSD3Q96ES6 412 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 EXOC2Q96KP1 924 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 ALG1Q9BT22 464 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 PCMTD2Q9NV79 361 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 TMEM59LQ9UK28 342 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 NUB1Q9Y5A7 615 aa4.71□□□□□ -1.66
SPIRE1-212ENST00000588236 CEP164Q9UPV0 1460 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 A0A1W2PQ27 194 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 A0A1W2PQ64 194 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 A0A1W2PQC6 194 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 A0A1W2PQD8 194 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 ASLP04424 464 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 GDNFP39905 211 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 GRIA2P42262 883 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 SLC14A2Q15849 920 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 USP53Q70EK8 1073 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 PPM1KQ8N3J5 372 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 KREMEN2Q8NCW0 462 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 GSTCDQ8NEC7 633 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 FLCNQ8NFG4 579 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 FRS2Q8WU20 508 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 C1orf159Q96HA4 380 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 MAP6Q96JE9 813 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 CARS2Q9HA77 564 aaKnown RBP4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 MAPRE3Q9UPY8 281 aa4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 TIMM13Q9Y5L4 95 aaPredicted RBP4.7□□□□□ -1.66
SPIRE1-212ENST00000588236 TMEM82A0PJX8 343 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 H7BY64 318 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 TBX1O43435 398 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 ADAM23O75077 832 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 CD8BP10966 210 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 PLS3P13797 630 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 IFNGR1P15260 489 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 SOX5P35711 763 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 ARL4AP40617 200 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 RPL11P62913 178 aaKnown RBP4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 LSAMPQ13449 338 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 LAPTM5Q13571 262 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 LRP8Q14114 963 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 DALRD3Q5D0E6 543 aaKnown RBP4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 FAM47CQ5HY64 1035 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 YOD1Q5VVQ6 348 aaPredicted RBP4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 FOXB2Q5VYV0 432 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 KIF18BQ86Y91 864 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 TP53INP2Q8IXH6 220 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 ERVK13-1Q9NX77 482 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 U3KQE9 123 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 PEG3Q9GZU2 1588 aa4.69□□□□□ -1.66
SPIRE1-212ENST00000588236 FADS2P1A8MWK0 482 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 BIN1O00499 593 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 WNT9AO14904 365 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 MAFKO60675 156 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 FKTNO75072 461 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 C6orf222P0C671 652 aaPredicted RBP4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 ZGLP1P0C6A0 271 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 POU3F2P20265 443 aaPredicted RBP4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 IGFALSP35858 605 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 AFMP43652 599 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 RTP1P59025 263 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 BNIP3Q12983 259 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 PAK1Q13153 545 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 CHRNA2Q15822 529 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 TM4SF20Q53R12 229 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 LBX2Q6XYB7 198 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 KRT26Q7Z3Y9 468 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 DDX53Q86TM3 631 aaKnown RBP4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 CABP7Q86V35 215 aa4.68□□□□□ -1.66
SPIRE1-212ENST00000588236 ASIC4Q96FT7 647 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms