RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
VMP1-207ENST00000588131 PTPN18Q99952 460 aa12.92□□□□□ -0.34
VMP1-207ENST00000588131 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
VMP1-207ENST00000588131 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
VMP1-207ENST00000588131 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
VMP1-207ENST00000588131 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
VMP1-207ENST00000588131 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
VMP1-207ENST00000588131 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
VMP1-207ENST00000588131 FAM155AB1AL88 458 aaPredicted RBP12.91□□□□□ -0.34
VMP1-207ENST00000588131 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 PDHXO00330 501 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 EDIL3O43854 480 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 YEATS4O95619 227 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 CFBP00751 764 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 CYP2C8P10632 490 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 PLS1Q14651 629 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 STK38Q15208 465 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 LINC00301Q8NCQ3 95 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.91□□□□□ -0.34
VMP1-207ENST00000588131 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
VMP1-207ENST00000588131 ELP1O95163 1332 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
VMP1-207ENST00000588131 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 STAT3P40763 770 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 HSD17B4P51659 736 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 GHRHRQ02643 423 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 AP3B2Q13367 1082 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 ZNF174Q15697 407 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 CHRDL2Q6WN34 429 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 RBPJLQ9UBG7 517 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
VMP1-207ENST00000588131 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
VMP1-207ENST00000588131 SPTLC2O15270 562 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 LETM2Q2VYF4 491 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 SLC30A10Q6XR72 485 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 NEK8Q86SG6 692 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 FCHSD1Q86WN1 690 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 RIOX2Q8IUF8 465 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 SPATC1LQ9H0A9 340 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 MYH7BA7E2Y1 1941 aa12.89□□□□□ -0.35
VMP1-207ENST00000588131 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
VMP1-207ENST00000588131 TDP2O95551 362 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
VMP1-207ENST00000588131 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
VMP1-207ENST00000588131 MCM7P33993 719 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 Q3C1V9 767 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 MCTP2Q6DN12 878 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 NSMFQ6X4W1 530 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 TEX2Q8IWB9 1127 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
VMP1-207ENST00000588131 CRYGNQ8WXF5 182 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 HHIPL1Q96JK4 782 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 ZIC5Q96T25 663 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
VMP1-207ENST00000588131 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 RABGAP1Q9Y3P9 1069 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
VMP1-207ENST00000588131 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 PPP6R2O75170 966 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 PTMSP20962 102 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 SREBF1P36956 1147 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 ME1P48163 572 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 UBE2HP62256 183 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 CYP4F22Q6NT55 531 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 FBXO2Q9UK22 296 aaPredicted RBP12.87□□□□□ -0.35
VMP1-207ENST00000588131 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 LCTP09848 1927 aa12.87□□□□□ -0.35
VMP1-207ENST00000588131 APLP1P51693 650 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 ERVK-24P63145 666 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 UBXN2AP68543 259 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 ARHGAP4P98171 946 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms