RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 LAMA2P24043 3122 aaKnown RBP16.66■□□□□ 0.26
ERCC1-205ENST00000587888 MYL3P08590 195 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 PDHBP11177 359 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 SLC30A10Q6XR72 485 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 CLEC4DQ8WXI8 215 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 HERVK_113Q902F9 699 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 CXXC1Q9P0U4 656 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-205ENST00000587888 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
ERCC1-205ENST00000587888 TTC14Q96N46 770 aa16.64■□□□□ 0.25
ERCC1-205ENST00000587888 GAS2L1Q99501 681 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-205ENST00000587888 NOC4LQ9BVI4 516 aaKnown RBP16.64■□□□□ 0.25
ERCC1-205ENST00000587888 SEZ6LQ9BYH1 1024 aa16.64■□□□□ 0.25
ERCC1-205ENST00000587888 UBA5Q9GZZ9 404 aa16.64■□□□□ 0.25
ERCC1-205ENST00000587888 PRDM12Q9H4Q4 367 aa16.64■□□□□ 0.25
ERCC1-205ENST00000587888 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-205ENST00000587888 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
ERCC1-205ENST00000587888 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 SDSP20132 328 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 PDE4DQ08499 809 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 TBC1D10CQ8IV04 446 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 SCLYQ96I15 445 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 ALDH8A1Q9H2A2 487 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-205ENST00000587888 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
ERCC1-205ENST00000587888 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
ERCC1-205ENST00000587888 POLR3EQ9NVU0 708 aa16.63■□□□□ 0.25
ERCC1-205ENST00000587888 LCTP09848 1927 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 A0A0C4DFX4 3053 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
ERCC1-205ENST00000587888 ZNF213O14771 459 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 CYP2C9P11712 490 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 CPT1AP50416 773 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
ERCC1-205ENST00000587888 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
ERCC1-205ENST00000587888 USH1GQ495M9 461 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
ERCC1-205ENST00000587888 ESR2Q92731 530 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 WNT8AQ9H1J5 351 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 CPVLQ9H3G5 476 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 PRDM6Q9NQX0 595 aa16.62■□□□□ 0.25
ERCC1-205ENST00000587888 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 ZBBXA8MT70 800 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 IGFBP4P22692 258 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 RABGGTBP53611 331 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 RAB30Q15771 203 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 COPS5Q92905 334 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 MTG1Q9BT17 334 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 RWDD1Q9H446 243 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-205ENST00000587888 SLC28A3Q9HAS3 691 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 SLC4A7Q9Y6M7 1214 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 ZMYM6O95789 1325 aa16.61■□□□□ 0.25
ERCC1-205ENST00000587888 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
ERCC1-205ENST00000587888 CHMP4BP1P59074 171 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 BRDTQ58F21 947 aaPredicted RBP16.6■□□□□ 0.25
ERCC1-205ENST00000587888 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
ERCC1-205ENST00000587888 DEFB128Q7Z7B8 93 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
ERCC1-205ENST00000587888 YBX2Q9Y2T7 364 aaKnown RBP16.6■□□□□ 0.25
ERCC1-205ENST00000587888 TNKSO95271 1327 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 NEDD4P46934 1319 aa16.6■□□□□ 0.25
ERCC1-205ENST00000587888 B4DLN1 442 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 KDM4AO75164 1064 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 IGHDP01880 384 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 MYOGP15173 224 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
ERCC1-205ENST00000587888 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
ERCC1-205ENST00000587888 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 DGKHQ86XP1 1220 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
ERCC1-205ENST00000587888 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
ERCC1-205ENST00000587888 ADGRE1Q14246 886 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 IQCA1Q86XH1 822 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 VWCEQ96DN2 955 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms