RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 SOCS4Q8WXH5 440 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 APBA2Q99767 749 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 DIS3Q9Y2L1 958 aaKnown RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 ABCB11O95342 1321 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 MCM3APO60318 1980 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 INHAP05111 366 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 HSD17B4P51659 736 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 WWC2Q6AWC2 1192 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 MAMDC4Q6UXC1 1216 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.64e-7■■■■■ 40.8
CHAF1A-206ENST00000587739 AIFM3Q96NN9 605 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
CHAF1A-206ENST00000587739 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 STXBP3O00186 592 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 MEIS2O14770 477 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 ZNF865P0CJ78 1059 aaPredicted RBP11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 CALML3P27482 149 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 RABEP1Q15276 862 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 MORC4Q8TE76 937 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
CHAF1A-206ENST00000587739 CCDC196A0A1B0GTZ2 297 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 HMGCRP04035 888 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 CCL5P13501 91 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 ANKRD1Q15327 319 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 LHX8Q68G74 356 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 USP17L6PQ6QN14 398 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 SLC26A6Q9BXS9 759 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 SLKQ9H2G2 1235 aaPredicted RBP11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 PNMA2Q9UL42 364 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
CHAF1A-206ENST00000587739 ADCY6O43306 1168 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 EDIL3O43854 480 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 JAK2O60674 1132 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 CFBP00751 764 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 CYBAP13498 195 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 PTGS1P23219 599 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 EDNRBP24530 442 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 NSUN7Q8NE18 718 aaKnown RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 RNF26Q9BY78 433 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 MAF1Q9H063 256 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 PDGFCQ9NRA1 345 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 GJB4Q9NTQ9 266 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 PFASO15067 1338 aa11.26□□□□□ -0.61
CHAF1A-206ENST00000587739 SCG2P13521 617 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 NPY5RQ15761 445 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 UBE2SQ16763 222 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 IL31RAQ8NI17 732 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 UPF2Q9HAU5 1272 aaKnown RBP11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 RPTORQ8N122 1335 aa11.25□□□□□ -0.61
CHAF1A-206ENST00000587739 SMCO2A6NFE2 343 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 RGS20O76081 388 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 POLR2MP0CAP2 368 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 FCHSD1Q86WN1 690 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms