RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 ZIM3Q96PE6 472 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 PCDHA4Q9UN74 947 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 DCCP43146 1447 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 RREB1Q92766 1687 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 PJA2O43164 708 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 KIF5BP33176 963 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 MATR3P43243 847 aaKnown RBP eCLIP18.28■□□□□ 0.52
RANBP3-209ENST00000587411 COBLL1Q53SF7 1204 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 ANKRD40Q6AI12 368 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 TYW1BQ6NUM6 668 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
RANBP3-209ENST00000587411 C1orf131Q8NDD1 294 aaKnown RBP18.28■□□□□ 0.52
RANBP3-209ENST00000587411 CABS1Q96KC9 395 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 HINFPQ9BQA5 517 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 CARD10Q9BWT7 1032 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 RABEP2Q9H5N1 569 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 ARHGAP20Q9P2F6 1191 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
RANBP3-209ENST00000587411 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 ORC4O43929 436 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 PAK2Q13177 524 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 CFAP58Q5T655 872 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 CD302Q8IX05 232 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 MREGQ8N565 214 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 EPN3Q9H201 632 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 SRRM3A6NNA2 597 aaPredicted RBP18.27■□□□□ 0.52
RANBP3-209ENST00000587411 PRPHP41219 470 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 FNTAP49354 379 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 CFAP221Q4G0U5 840 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 TTC19Q6DKK2 380 aaPredicted RBP18.27■□□□□ 0.52
RANBP3-209ENST00000587411 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
RANBP3-209ENST00000587411 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 GDF3Q9NR23 364 aa18.27■□□□□ 0.52
RANBP3-209ENST00000587411 SHANK3Q9BYB0 1731 aa18.27■□□□□ 0.51
RANBP3-209ENST00000587411 CCDC194A0A1B0GVG4 234 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 AKR1B10O60218 316 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 EIF4A3P38919 411 aaKnown RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 PDE4DQ08499 809 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 RPAINQ86UA6 219 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 IQCKQ8N0W5 287 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 GGA2Q9UJY4 613 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 LOC102724159A0A0B4J2E5 919 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 PWP2Q15269 919 aaKnown RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 AK8Q96MA6 479 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 PP2D1A8MPX8 630 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 H0YHG0 523 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 LSP1P33241 339 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 MAGEA1P43355 309 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 DDR1Q08345 913 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 PIGBQ92521 554 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 C7orf25Q9BPX7 421 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
RANBP3-209ENST00000587411 ABCF2Q9UG63 623 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
RANBP3-209ENST00000587411 ABCB11O95342 1321 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 ADAMTS3O15072 1205 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
RANBP3-209ENST00000587411 NAP1L1P55209 391 aaKnown RBP18.25■□□□□ 0.51
RANBP3-209ENST00000587411 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
RANBP3-209ENST00000587411 MAP2K2P36507 400 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 VWA3BQ502W6 1294 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
RANBP3-209ENST00000587411 TLR10Q9BXR5 811 aa18.25■□□□□ 0.51
RANBP3-209ENST00000587411 CXCR5P32302 372 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 AMPD3Q01432 767 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 CNNM4Q6P4Q7 775 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 TACO1Q9BSH4 297 aaKnown RBP18.24■□□□□ 0.51
RANBP3-209ENST00000587411 TMEM60Q9H2L4 133 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 M0R2N6 131 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 PPP1R37O75864 691 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
RANBP3-209ENST00000587411 ATP1A2P50993 1020 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 ASIC1P78348 528 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
RANBP3-209ENST00000587411 EDEM3Q9BZQ6 932 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
RANBP3-209ENST00000587411 ZNF233A6NK53 670 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
RANBP3-209ENST00000587411 FGFR1OPO95684 399 aaKnown RBP18.23■□□□□ 0.51
RANBP3-209ENST00000587411 KRT14P02533 472 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms