RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 PPP1R16BQ96T49 567 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 NAP1L3Q99457 506 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 KCNK9Q9NPC2 374 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 NUB1Q9Y5A7 615 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 CSPG5O95196 566 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 PEX26Q7Z412 305 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 KLHL7Q8IXQ5 586 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 OR8K1Q8NGG5 319 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 FAM84BQ96KN1 310 aaPredicted RBP10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 MED10Q9BTT4 135 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 WDR11Q9BZH6 1224 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 DCP1AQ9NPI6 582 aaPredicted RBP10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 PTCH1Q13635 1447 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 H0YCG3 227 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 OPA1O60313 960 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 SCARF1Q14162 830 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 ARHGEF6Q15052 776 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 CFAP58Q5T655 872 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 GBP6Q6ZN66 633 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.69
GPATCH8-205ENST00000587228 USP17L5A8MUK1 530 aa10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 MTERF2Q49AM1 385 aa10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 FAM83BQ5T0W9 1011 aa10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 GOLGA5Q8TBA6 731 aa10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.7
GPATCH8-205ENST00000587228 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 GCFC2P16383 781 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 CCDC14Q49A88 953 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 DAAM2Q86T65 1068 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 FAM160B2Q86V87 743 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 CARD6Q9BX69 1037 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 ZEB2O60315 1214 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 ZBTB16Q05516 673 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 SCYL2Q6P3W7 929 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 C2orf69Q8N8R5 385 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 DESI2Q9BSY9 194 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 PCDHB6Q9Y5E3 794 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 SPATA31A1Q5TZJ5 1347 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 GAS8O95995 478 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 TTC14Q96N46 770 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 SPON1Q9HCB6 807 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 STIM2Q9P246 746 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 IMPACTQ9P2X3 320 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 PNMA6FA0A0J9YX94 578 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 RFX1P22670 979 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 NR2F2P24468 414 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 YWHAEP62258 255 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 FOXO4P98177 505 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 RPS6KA1Q15418 735 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 KRT222Q8N1A0 295 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 CDHR1Q96JP9 859 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 SPATA31A6Q5VVP1 1343 aa10.7□□□□□ -0.7
GPATCH8-205ENST00000587228 SPHKAPQ2M3C7 1700 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CAPN9O14815 690 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 MARK3P27448 753 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 MXRA7P84157 204 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 TRIML1Q8N9V2 468 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 HESX1Q9UBX0 185 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 LAD1O00515 517 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CLIC2O15247 247 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 PPARDQ03181 441 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 RNF207Q6ZRF8 634 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 SP8Q8IXZ3 490 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 GPT2Q8TD30 523 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 METTL14Q9HCE5 456 aaKnown RBP10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 A0A1W2PQ27 194 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 A0A1W2PQ64 194 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 A0A1W2PQD8 194 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 TFDP1Q14186 410 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 SPATA1Q5VX52 437 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 BSPRYQ5W0U4 402 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 ANKRD13CQ8N6S4 541 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 LINC00301Q8NCQ3 95 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 NACC1Q96RE7 527 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 STMN4Q9H169 189 aaPredicted RBP10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 PARP2Q9UGN5 583 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CEP152O94986 1710 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 IFNB1P01574 187 aa10.69□□□□□ -0.7
GPATCH8-205ENST00000587228 CCND2P30279 289 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms