RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 UMODL1Q5DID0 1318 aa18.47■□□□□ 0.55
VAT1-205ENST00000587173 GRXCR1A8MXD5 290 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 B4GALT4O60513 344 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 DUSP28Q4G0W2 176 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 AKNAD1Q5T1N1 836 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 SLC30A10Q6XR72 485 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 MFSD6Q6ZSS7 791 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 TBC1D10CQ8IV04 446 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 TTC14Q96N46 770 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
VAT1-205ENST00000587173 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
VAT1-205ENST00000587173 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 CALML3P27482 149 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 PBX2P40425 430 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 ZNF543Q08ER8 600 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
VAT1-205ENST00000587173 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 WDR11Q9BZH6 1224 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 TRPV6Q9H1D0 765 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 PNMA2Q9UL42 364 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 EYSQ5T1H1 3165 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
VAT1-205ENST00000587173 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 SDSP20132 328 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 CCL23P55773 120 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 RNF207Q6ZRF8 634 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 CHD1LQ86WJ1 897 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 NOC4LQ9BVI4 516 aaKnown RBP18.44■□□□□ 0.54
VAT1-205ENST00000587173 MTIF3Q9H2K0 278 aaKnown RBP18.44■□□□□ 0.54
VAT1-205ENST00000587173 NEDD4P46934 1319 aa18.44■□□□□ 0.54
VAT1-205ENST00000587173 ZNF213O14771 459 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 FGBP02675 491 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 ESR2Q92731 530 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 ALDH8A1Q9H2A2 487 aaPredicted RBP18.43■□□□□ 0.54
VAT1-205ENST00000587173 POLR3EQ9NVU0 708 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 CXXC1Q9P0U4 656 aaPredicted RBP18.43■□□□□ 0.54
VAT1-205ENST00000587173 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
VAT1-205ENST00000587173 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
VAT1-205ENST00000587173 HIP1O00291 1037 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 MYL3P08590 195 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 NT5C2P49902 561 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 CPT1AP50416 773 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
VAT1-205ENST00000587173 NUCB1Q02818 461 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 PDE4DQ08499 809 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 USP38Q8NB14 1042 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
VAT1-205ENST00000587173 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 DIAPH3Q9NSV4 1193 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 MSRAQ9UJ68 235 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 LCTP09848 1927 aa18.42■□□□□ 0.54
VAT1-205ENST00000587173 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 PURAQ00577 322 aaKnown RBP18.41■□□□□ 0.54
VAT1-205ENST00000587173 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 RAB30Q15771 203 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 USH1GQ495M9 461 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
VAT1-205ENST00000587173 OTOP2Q7RTS6 562 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 PLEKHM2Q8IWE5 1019 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 GAS2L1Q99501 681 aaPredicted RBP18.41■□□□□ 0.54
VAT1-205ENST00000587173 UBA5Q9GZZ9 404 aa18.41■□□□□ 0.54
VAT1-205ENST00000587173 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
VAT1-205ENST00000587173 TRMT13Q9NUP7 481 aaKnown RBP18.41■□□□□ 0.54
VAT1-205ENST00000587173 CUL9Q8IWT3 2517 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 IGHDP01880 384 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 EDNRBP24530 442 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
VAT1-205ENST00000587173 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 SCLYQ96I15 445 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 MTG1Q9BT17 334 aaPredicted RBP18.4■□□□□ 0.54
VAT1-205ENST00000587173 CPVLQ9H3G5 476 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 PRDM12Q9H4Q4 367 aa18.4■□□□□ 0.54
VAT1-205ENST00000587173 NKRFO15226 690 aaKnown RBP eCLIP18.39■□□□□ 0.53
VAT1-205ENST00000587173 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 CYP2C9P11712 490 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 BRDTQ58F21 947 aaPredicted RBP18.39■□□□□ 0.53
VAT1-205ENST00000587173 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 RPUSD2Q8IZ73 545 aaKnown RBP18.39■□□□□ 0.53
VAT1-205ENST00000587173 SCFD2Q8WU76 684 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 COPS5Q92905 334 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 NKX2-4Q9H2Z4 354 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 TNKSO95271 1327 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 RAD50Q92878 1312 aa18.39■□□□□ 0.53
VAT1-205ENST00000587173 B4DLN1 442 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 KDM4AO75164 1064 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
VAT1-205ENST00000587173 FAM47CQ5HY64 1035 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 KAT14Q9H8E8 782 aa18.38■□□□□ 0.53
VAT1-205ENST00000587173 YBX2Q9Y2T7 364 aaKnown RBP18.38■□□□□ 0.53
VAT1-205ENST00000587173 ZBBXA8MT70 800 aa18.37■□□□□ 0.53
VAT1-205ENST00000587173 B4E1Z4 1266 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms