RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 PURAQ00577 322 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 CNTN2Q02246 1040 aa15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 ASIC4Q96FT7 647 aa15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 MYH8P13535 1937 aa15.35■□□□□ 0.05
SMARCA4-211ENST00000586921 ABHD14A-ACY1A0A1B0GW23 586 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 ASB14A6NK59 587 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 H3BNC9 293 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 MYL3P08590 195 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 AKR1B1P15121 316 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 DLX2Q07687 328 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 GPM6BQ13491 265 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 MCTP2Q6DN12 878 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 IQSEC1Q6DN90 963 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 CCDC155Q8N6L0 562 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 SAMD11Q96NU1 681 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 PDGFCQ9NRA1 345 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-211ENST00000586921 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 EFCAB14O75071 495 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 ZAP70P43403 619 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 CCDC158Q5M9N0 1113 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 CHST13Q8NET6 341 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 AFAP1L1Q8TED9 768 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 PPP1R13LQ8WUF5 828 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 MTG1Q9BT17 334 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 CD207Q9UJ71 328 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 SCN10AQ9Y5Y9 1956 aa15.33■□□□□ 0.04
SMARCA4-211ENST00000586921 TMEM63BQ5T3F8 832 aa15.32■□□□□ 0.04
SMARCA4-211ENST00000586921 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
SMARCA4-211ENST00000586921 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-211ENST00000586921 CAGE1Q8TC20 777 aa15.32■□□□□ 0.04
SMARCA4-211ENST00000586921 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-211ENST00000586921 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 USP17L12C9JPN9 530 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 USP17L21D6R901 530 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 ZBED4O75132 1171 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 TBX10O75333 385 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 SELPP16109 830 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 CPT1AP50416 773 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 IKBKEQ14164 716 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 GPNMBQ14956 572 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 TAPT1Q6NXT6 567 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 LRRC8DQ7L1W4 858 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 NUP88Q99567 741 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-211ENST00000586921 CXCL10P02778 98 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 MAP1BP46821 2468 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 HYAL1Q12794 435 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 PTGISQ16647 500 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 TCTN1Q2MV58 587 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 DYNLL2Q96FJ2 89 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 CEP250Q9BV73 2442 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 KANSL2Q9H9L4 492 aa15.3■□□□□ 0.04
SMARCA4-211ENST00000586921 NBNO60934 754 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 CYP2D6P10635 497 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 PTPN11Q06124 597 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 CBX2Q14781 532 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 DUSP28Q4G0W2 176 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 FBXO11Q86XK2 927 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 TMEM192Q8IY95 271 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
SMARCA4-211ENST00000586921 MICAL3Q7RTP6 2002 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 PDGFBP01127 241 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 AMHP03971 560 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 HTRA4P83105 476 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 PUM1Q14671 1186 aaKnown RBP eCLIP15.28■□□□□ 0.042e-9■□□□□ 9.4
SMARCA4-211ENST00000586921 BRDTQ58F21 947 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 KIFC2Q96AC6 838 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 ACAD9Q9H845 621 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 SPTBN2O15020 2390 aa15.28■□□□□ 0.04
SMARCA4-211ENST00000586921 ATG2AQ2TAZ0 1938 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 CHMP4BP1P59074 171 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.042e-9■■■□□ 18.4
SMARCA4-211ENST00000586921 TMED8Q6PL24 325 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms