RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SASS6Q6UVJ0 657 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 USP49Q70CQ1 688 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 PROCA1Q8NCQ7 364 aaPredicted RBP23.24■■□□□ 1.31
ATG4D-204ENST00000586417 FAM13BQ9NYF5 915 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 FAM155AB1AL88 458 aaPredicted RBP23.24■■□□□ 1.31
ATG4D-204ENST00000586417 CLK2P49760 499 aaKnown RBP23.24■■□□□ 1.31
ATG4D-204ENST00000586417 JAKMIP3Q5VZ66 844 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 KIFC2Q96AC6 838 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 FEM1BQ9UK73 627 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 PRR12Q9ULL5 1215 aa23.24■■□□□ 1.31
ATG4D-204ENST00000586417 PCNTO95613 3336 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 FLOT1O75955 427 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 SLC10A3P09131 477 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 GTF2A2P52657 109 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 IL17AQ16552 155 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 GPAT2Q6NUI2 795 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 BRI3BPQ8WY22 251 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 ERCC4Q92889 916 aaPredicted RBP23.23■■□□□ 1.31
ATG4D-204ENST00000586417 CREBZFQ9NS37 354 aa23.23■■□□□ 1.31
ATG4D-204ENST00000586417 LONRF3Q496Y0 759 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 ARL6IP4Q66PJ3 421 aaKnown RBP23.22■■□□□ 1.31
ATG4D-204ENST00000586417 CYP4F22Q6NT55 531 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 CHURC1Q8WUH1 139 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 CCL15-CCL14A0A0B4J2E2 113 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 PLA2G6O60733 806 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 HTRA3P83110 453 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 GRM1Q13255 1194 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 CCL15Q16663 113 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 ANO6Q4KMQ2 910 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 KRBA2Q6ZNG9 492 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 FASTKD5Q7L8L6 764 aaKnown RBP23.22■■□□□ 1.31
ATG4D-204ENST00000586417 TBCKQ8TEA7 893 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 CUL5Q93034 780 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 HHIPL1Q96JK4 782 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 KIAA1468Q9P260 1216 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 AGTPBP1Q9UPW5 1226 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 PCDHA1Q9Y5I3 950 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
ATG4D-204ENST00000586417 VWA3AA6NCI4 1184 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L15C9J2P7 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L13C9JLJ4 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L11C9JVI0 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L18D6R9N7 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L22D6RA61 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L17D6RBQ6 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L19D6RCP7 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L20D6RJB6 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 CETPP11597 493 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 USP17L24Q0WX57 530 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 UVSSAQ2YD98 709 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 PAXIP1Q6ZW49 1069 aaPredicted RBP23.21■■□□□ 1.31
ATG4D-204ENST00000586417 NEK8Q86SG6 692 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 FAM160B2Q86V87 743 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 FAM200AQ8TCP9 573 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 PTPN18Q99952 460 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 SLF1Q9BQI6 1058 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
ATG4D-204ENST00000586417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.2■■□□□ 1.3
ATG4D-204ENST00000586417 EDIL3O43854 480 aa23.2■■□□□ 1.3
ATG4D-204ENST00000586417 MRPL12P52815 198 aaKnown RBP23.2■■□□□ 1.3
ATG4D-204ENST00000586417 UBE2SQ16763 222 aa23.2■■□□□ 1.3
ATG4D-204ENST00000586417 ELOA2Q8IYF1 753 aaPredicted RBP23.2■■□□□ 1.3
ATG4D-204ENST00000586417 PRPF38AQ8NAV1 312 aaKnown RBP23.2■■□□□ 1.3
ATG4D-204ENST00000586417 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
ATG4D-204ENST00000586417 AMNQ9BXJ7 453 aa23.2■■□□□ 1.3
ATG4D-204ENST00000586417 PSTPIP2Q9H939 334 aa23.2■■□□□ 1.3
ATG4D-204ENST00000586417 PPP1R9AQ9ULJ8 1098 aa23.2■■□□□ 1.3
ATG4D-204ENST00000586417 POLR2DO15514 142 aaKnown RBP23.19■■□□□ 1.3
ATG4D-204ENST00000586417 HOXA7P31268 230 aaPredicted RBP23.19■■□□□ 1.3
ATG4D-204ENST00000586417 LETM2Q2VYF4 491 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 CCDC102AQ96A19 550 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 COL11A1P12107 1806 aaPredicted RBP23.19■■□□□ 1.3
ATG4D-204ENST00000586417 A0A087X0B3 334 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 BTBD19C9JJ37 291 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 COG2Q14746 738 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 STX1AQ16623 288 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 POTEEQ6S8J3 1075 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 ATG4CQ96DT6 458 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 DNAJC25Q9H1X3 360 aa23.19■■□□□ 1.3
ATG4D-204ENST00000586417 RASSF10A6NK89 507 aa23.18■■□□□ 1.3
ATG4D-204ENST00000586417 LAD1O00515 517 aa23.18■■□□□ 1.3
ATG4D-204ENST00000586417 ACTN4O43707 911 aaKnown RBP23.18■■□□□ 1.3
ATG4D-204ENST00000586417 TAL1P17542 331 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-204ENST00000586417 ORC2Q13416 577 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-204ENST00000586417 DEFB115Q30KQ5 88 aa23.18■■□□□ 1.3
ATG4D-204ENST00000586417 CNNM3Q8NE01 707 aa23.18■■□□□ 1.3
ATG4D-204ENST00000586417 P2RX7Q99572 595 aaKnown RBP23.18■■□□□ 1.3
ATG4D-204ENST00000586417 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
ATG4D-204ENST00000586417 ASCC2Q9H1I8 757 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-204ENST00000586417 A0A087WWV3 80 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 CCNT1O60563 726 aaKnown RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 DSG3P32926 999 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 PRPHP41219 470 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 FAM43AQ8N2R8 423 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 PPP1R9BQ96SB3 815 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms