RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
TPM4-203ENST00000586193 ITIH2P19823 946 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 CYP2C19P33261 490 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 KPNA1P52294 538 aaPredicted RBP8.18□□□□□ -1.1
TPM4-203ENST00000586193 FAPQ12884 760 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 ODF1Q14990 250 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 GRAMD1BQ3KR37 738 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 ARHGAP29Q52LW3 1261 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 PGM2L1Q6PCE3 622 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 SLCO4C1Q6ZQN7 724 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 PPIL6Q8IXY8 311 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 C1orf162Q8NEQ5 155 aaPredicted RBP8.18□□□□□ -1.1
TPM4-203ENST00000586193 MIPEPQ99797 713 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 DSCC1Q9BVC3 393 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 PTPRHQ9HD43 1115 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 B4GALT6Q9UBX8 382 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
TPM4-203ENST00000586193 FAM50BQ9Y247 325 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 SF3B6Q9Y3B4 125 aaKnown RBP8.18□□□□□ -1.1
TPM4-203ENST00000586193 RBAK-RBAKDNI3L0D1 243 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 ARVCFO00192 962 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 APAF1O14727 1248 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 NRDCO43847 1150 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 LTFP02788 710 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 CKMP06732 381 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 CENPBP07199 599 aaPredicted RBP8.17□□□□□ -1.1
TPM4-203ENST00000586193 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
TPM4-203ENST00000586193 ASPAP45381 313 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 GPR85P60893 370 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 IRX6P78412 446 aaPredicted RBP8.17□□□□□ -1.1
TPM4-203ENST00000586193 GBX1Q14549 363 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 TMEM240Q5SV17 173 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
TPM4-203ENST00000586193 LETMD1Q6P1Q0 360 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 MORC1Q86VD1 984 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 SMYD4Q8IYR2 804 aaPredicted RBP8.17□□□□□ -1.1
TPM4-203ENST00000586193 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 ASPNQ9BXN1 380 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 C14orf119Q9NWQ9 140 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
TPM4-203ENST00000586193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.16□□□□□ -1.1
TPM4-203ENST00000586193 LRRN2O75325 713 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 WISP1O95388 367 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 THBDP07204 575 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 IGF1RP08069 1367 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 SNRPBP14678 240 aaKnown RBP8.16□□□□□ -1.1
TPM4-203ENST00000586193 OCRLQ01968 901 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
TPM4-203ENST00000586193 GTF2H3Q13889 308 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
TPM4-203ENST00000586193 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 PPM1EQ8WY54 764 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 HSPBAP1Q96EW2 488 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 ZFYVE21Q9BQ24 234 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 MCMBPQ9BTE3 642 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 GPRC5CQ9NQ84 441 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 PCOLCE2Q9UKZ9 415 aa8.16□□□□□ -1.1
TPM4-203ENST00000586193 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 H0Y8X5 98 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 MEIS1O00470 390 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 NRG2O14511 850 aaPredicted RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 MSCO60682 206 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 FGAP02671 866 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 SOD2P04179 222 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 SAFBQ15424 915 aaKnown RBP eCLIP8.15□□□□□ -1.1
TPM4-203ENST00000586193 INO80DQ53TQ3 878 aaPredicted RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 ILDR2Q71H61 639 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 CMTR2Q8IYT2 770 aaKnown RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 CHST14Q8NCH0 376 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 PCDH19Q8TAB3 1148 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 FRS2Q8WU20 508 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 SCYL1Q96KG9 808 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 STRBPQ96SI9 672 aaKnown RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 ATG3Q9NT62 314 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 FAM105AQ9NUU6 356 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 MKS1Q9NXB0 559 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 H2AFY2Q9P0M6 372 aaPredicted RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 GMPR2Q9P2T1 348 aaKnown RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 SAP30BPQ9UHR5 308 aaKnown RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 TMEFF2Q9UIK5 374 aaPredicted RBP8.15□□□□□ -1.1
TPM4-203ENST00000586193 MINPP1Q9UNW1 487 aa8.15□□□□□ -1.1
TPM4-203ENST00000586193 ANO9A1A5B4 782 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 STXBP3O00186 592 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 ARNTLO00327 626 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 ERC2O15083 957 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 IL33O95760 270 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 CFBP00751 764 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 RBP3P10745 1247 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 SERPINB3P29508 390 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 ETV3P41162 512 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 HTR3AP46098 478 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 MECP2P51608 486 aaKnown RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 SESN3P58005 492 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 GALEQ14376 348 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms