RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 ZNF589Q86UQ0 364 aaPredicted RBP23.7■■□□□ 1.38
CLPTM1-204ENST00000585961 VTA1Q9NP79 307 aa23.7■■□□□ 1.38
CLPTM1-204ENST00000585961 Q9Y3F1 56 aa23.7■■□□□ 1.38
CLPTM1-204ENST00000585961 MYL3P08590 195 aa23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 ALDH5A1P51649 535 aaPredicted RBP23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 PSRC1Q6PGN9 363 aaPredicted RBP23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 HERVK_113Q902F9 699 aa23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 SCLYQ96I15 445 aa23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 LNPKQ9C0E8 428 aa23.69■■□□□ 1.38
CLPTM1-204ENST00000585961 CCDC85BQ15834 202 aaPredicted RBP23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 B4GALNT3Q6L9W6 998 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 MORC4Q8TE76 937 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 CLEC4DQ8WXI8 215 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 ZKSCAN3Q9BRR0 538 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 NOC4LQ9BVI4 516 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 NKX2-4Q9H2Z4 354 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 TCP11L1Q9NUJ3 509 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 ADD3Q9UEY8 706 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 MSRAQ9UJ68 235 aa23.68■■□□□ 1.38
CLPTM1-204ENST00000585961 PDHBP11177 359 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 CYP2C9P11712 490 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 IGFBP4P22692 258 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 RABGGTBP53611 331 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 DUSP28Q4G0W2 176 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 SLC30A10Q6XR72 485 aa23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 GAS2L1Q99501 681 aaPredicted RBP23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 TRMT13Q9NUP7 481 aaKnown RBP23.67■■□□□ 1.38
CLPTM1-204ENST00000585961 GOLGA8HP0CJ92 632 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 RNF207Q6ZRF8 634 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 MFSD6Q6ZSS7 791 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 OR6J1Q8NGC5 347 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 UBA5Q9GZZ9 404 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 WNT8AQ9H1J5 351 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 ALDH8A1Q9H2A2 487 aaPredicted RBP23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 CPVLQ9H3G5 476 aa23.66■■□□□ 1.38
CLPTM1-204ENST00000585961 MYOGP15173 224 aa23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 AKNAD1Q5T1N1 836 aa23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 COPS5Q92905 334 aa23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 GPHNQ9NQX3 736 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 YBX2Q9Y2T7 364 aaKnown RBP23.65■■□□□ 1.38
CLPTM1-204ENST00000585961 CHMP4BP1P59074 171 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 PDE4DQ08499 809 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 ZNF543Q08ER8 600 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 ADGRE1Q14246 886 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 USH1GQ495M9 461 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 FAM47CQ5HY64 1035 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 DEFB128Q7Z7B8 93 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 TBC1D10CQ8IV04 446 aa23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 RPUSD2Q8IZ73 545 aaKnown RBP23.64■■□□□ 1.37
CLPTM1-204ENST00000585961 ZBBXA8MT70 800 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 RPS6P62753 249 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 TBC1D5Q92609 795 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 VWCEQ96DN2 955 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 TTC14Q96N46 770 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 MTIF3Q9H2K0 278 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 SLC28A3Q9HAS3 691 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 POLR3EQ9NVU0 708 aa23.63■■□□□ 1.37
CLPTM1-204ENST00000585961 RBM47A0AV96 593 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 PURAQ00577 322 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 RAB30Q15771 203 aa23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 NBPF20Q3BBV1 942 aa23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 SYMPKQ92797 1274 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 SLC4A7Q9Y6M7 1214 aa23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 MYO9BQ13459 2157 aa23.62■■□□□ 1.37
CLPTM1-204ENST00000585961 CCDC171Q6TFL3 1326 aa23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 SDSP20132 328 aa23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 CPT1AP50416 773 aa23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 TTLL4Q14679 1199 aa23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 MTG1Q9BT17 334 aaPredicted RBP23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
CLPTM1-204ENST00000585961 TNKSO95271 1327 aa23.6■■□□□ 1.37
CLPTM1-204ENST00000585961 ZNF213O14771 459 aa23.6■■□□□ 1.37
CLPTM1-204ENST00000585961 SUPT20HL2P0C7V6 817 aa23.6■■□□□ 1.37
CLPTM1-204ENST00000585961 SPTBN5Q9NRC6 3674 aaKnown RBP23.6■■□□□ 1.37
CLPTM1-204ENST00000585961 TXNP10599 105 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-204ENST00000585961 PPP2R5BQ15173 497 aa23.59■■□□□ 1.37
CLPTM1-204ENST00000585961 TJAP1Q5JTD0 557 aa23.59■■□□□ 1.37
CLPTM1-204ENST00000585961 VAT1LQ9HCJ6 419 aa23.59■■□□□ 1.37
CLPTM1-204ENST00000585961 NEDD4P46934 1319 aa23.59■■□□□ 1.37
CLPTM1-204ENST00000585961 SNHG28P0DPA3 235 aa23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 CWC27Q6UX04 472 aaKnown RBP23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 ESR2Q92731 530 aa23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 TAAR1Q96RJ0 339 aa23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 RNF41Q9H4P4 317 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 CHD9Q3L8U1 2897 aa23.58■■□□□ 1.37
CLPTM1-204ENST00000585961 ARIH2O95376 493 aa23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 IGHDP01880 384 aa23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 ATP2A2P16615 1042 aaKnown RBP23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 BRDTQ58F21 947 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 SEPT14Q6ZU15 432 aa23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 MICALL1Q8N3F8 863 aa23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 SCFD2Q8WU76 684 aa23.57■■□□□ 1.36
CLPTM1-204ENST00000585961 LOC102724159A0A0B4J2E5 919 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 RBAK-RBAKDNI3L0D1 243 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 RFXAPO00287 272 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 KDM4AO75164 1064 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 EDNRBP24530 442 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 PWP2Q15269 919 aaKnown RBP23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 LY6KQ17RY6 165 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms