RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 TMEM47Q9BQJ4 181 aa19.56■□□□□ 0.72
CCDC57-219ENST00000584717 MTIF3Q9H2K0 278 aaKnown RBP19.56■□□□□ 0.72
CCDC57-219ENST00000584717 HELLSQ9NRZ9 838 aa19.56■□□□□ 0.72
CCDC57-219ENST00000584717 Q9Y3F1 56 aa19.56■□□□□ 0.72
CCDC57-219ENST00000584717 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 PTPDC1A2A3K4 754 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 FGRP09769 529 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 TOP1P11387 765 aaKnown RBP19.55■□□□□ 0.72
CCDC57-219ENST00000584717 ALX1Q15699 326 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 DUSP28Q4G0W2 176 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 SLC30A10Q6XR72 485 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 SCLYQ96I15 445 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 WDR11Q9BZH6 1224 aa19.55■□□□□ 0.72
CCDC57-219ENST00000584717 ADD3Q9UEY8 706 aaKnown RBP19.55■□□□□ 0.72
CCDC57-219ENST00000584717 YBX2Q9Y2T7 364 aaKnown RBP19.55■□□□□ 0.72
CCDC57-219ENST00000584717 FGAP02671 866 aa19.54■□□□□ 0.72
CCDC57-219ENST00000584717 CALML3P27482 149 aa19.54■□□□□ 0.72
CCDC57-219ENST00000584717 ADGRE1Q14246 886 aa19.54■□□□□ 0.72
CCDC57-219ENST00000584717 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
CCDC57-219ENST00000584717 SEZ6LQ9BYH1 1024 aa19.54■□□□□ 0.72
CCDC57-219ENST00000584717 ALDH8A1Q9H2A2 487 aaPredicted RBP19.54■□□□□ 0.72
CCDC57-219ENST00000584717 TRMT13Q9NUP7 481 aaKnown RBP19.54■□□□□ 0.72
CCDC57-219ENST00000584717 MYL3P08590 195 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 IGFBP4P22692 258 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 RABGGTBP53611 331 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 PDE1AP54750 535 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 HAND2P61296 217 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 CCDC85BQ15834 202 aaPredicted RBP19.53■□□□□ 0.72
CCDC57-219ENST00000584717 OR6J1Q8NGC5 347 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 SLC28A3Q9HAS3 691 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 POLR3EQ9NVU0 708 aa19.53■□□□□ 0.72
CCDC57-219ENST00000584717 REV3LO60673 3130 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 ZBBXA8MT70 800 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 PDHBP11177 359 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 CYP2C9P11712 490 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 MCMDC2Q4G0Z9 681 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 AKNAD1Q5T1N1 836 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
CCDC57-219ENST00000584717 PPP1R13LQ8WUF5 828 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 CLEC4DQ8WXI8 215 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 VWCEQ96DN2 955 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
CCDC57-219ENST00000584717 TNKSO95271 1327 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 TRANK1O15050 2925 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 HSPD1P10809 573 aaKnown RBP19.51■□□□□ 0.71
CCDC57-219ENST00000584717 CPT1AP50416 773 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
CCDC57-219ENST00000584717 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
CCDC57-219ENST00000584717 NMIQ13287 307 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-219ENST00000584717 RNF207Q6ZRF8 634 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 RPUSD2Q8IZ73 545 aaKnown RBP19.51■□□□□ 0.71
CCDC57-219ENST00000584717 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 TCP11L1Q9NUJ3 509 aa19.51■□□□□ 0.71
CCDC57-219ENST00000584717 RBM47A0AV96 593 aaKnown RBP19.5■□□□□ 0.71
CCDC57-219ENST00000584717 MYOGP15173 224 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 PDE4DQ08499 809 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 ZNF543Q08ER8 600 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 FAM47CQ5HY64 1035 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 MTG1Q9BT17 334 aaPredicted RBP19.5■□□□□ 0.71
CCDC57-219ENST00000584717 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
CCDC57-219ENST00000584717 THEGQ9P2T0 379 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 SCN5AQ14524 2016 aa19.5■□□□□ 0.71
CCDC57-219ENST00000584717 LOC102724159A0A0B4J2E5 919 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 SUPT20HL2P0C7V6 817 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 RPS6P62753 249 aaKnown RBP19.49■□□□□ 0.71
CCDC57-219ENST00000584717 TTLL4Q14679 1199 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 PWP2Q15269 919 aaKnown RBP19.49■□□□□ 0.71
CCDC57-219ENST00000584717 PPP2R2DQ66LE6 453 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 DEFB128Q7Z7B8 93 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 TBC1D10CQ8IV04 446 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 COPS5Q92905 334 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 ZMYM6O95789 1325 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 CCDC171Q6TFL3 1326 aa19.49■□□□□ 0.71
CCDC57-219ENST00000584717 SCN10AQ9Y5Y9 1956 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 BDP1A6H8Y1 2624 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 TNFRSF10AO00220 468 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
CCDC57-219ENST00000584717 NBPF20Q3BBV1 942 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 USH1GQ495M9 461 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 MFSD6Q6ZSS7 791 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 ATXN2LQ8WWM7 1075 aaKnown RBP19.48■□□□□ 0.71
CCDC57-219ENST00000584717 WDR19Q8NEZ3 1342 aa19.48■□□□□ 0.71
CCDC57-219ENST00000584717 XIRP2A4UGR9 3374 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 GOLGA8HP0CJ92 632 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 EDNRBP24530 442 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 BRDTQ58F21 947 aaPredicted RBP19.47■□□□□ 0.71
CCDC57-219ENST00000584717 MICALL1Q8N3F8 863 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 SCFD2Q8WU76 684 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 MPHOSPH6Q99547 160 aaKnown RBP19.47■□□□□ 0.71
CCDC57-219ENST00000584717 ZKSCAN3Q9BRR0 538 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 CPVLQ9H3G5 476 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 PCDHA11Q9Y5I1 949 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 NEDD4P46934 1319 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 RAD50Q92878 1312 aa19.47■□□□□ 0.71
CCDC57-219ENST00000584717 TANC1Q9C0D5 1861 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms