RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-227ENST00000583352 GRIN2DO15399 1336 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 LOC102724159A0A0B4J2E5 919 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 B4GALT4O60513 344 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 PTGS1P23219 599 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 SLC16A2P36021 539 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 CCL23P55773 120 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 PSMC6P62333 389 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 BAATQ14032 418 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 PWP2Q15269 919 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 ALX1Q15699 326 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 DUSP28Q4G0W2 176 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 AKNAD1Q5T1N1 836 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 VPS53Q5VIR6 699 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 TRPV6Q9H1D0 765 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 NKX2-4Q9H2Z4 354 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 CXXC1Q9P0U4 656 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 PNMA2Q9UL42 364 aa11.4□□□□□ -0.58
CDK5RAP3-227ENST00000583352 LCTP09848 1927 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CDC45O75419 566 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 FGRP09769 529 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SUPT20HL2P0C7V6 817 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TMEM63BQ5T3F8 832 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 OTOP2Q7RTS6 562 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MPHOSPH6Q99547 160 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ALDH8A1Q9H2A2 487 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SLC28A3Q9HAS3 691 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PRDM6Q9NQX0 595 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TCP11L1Q9NUJ3 509 aa11.39□□□□□ -0.59
CDK5RAP3-227ENST00000583352 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CUL9Q8IWT3 2517 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 COL6A3P12111 3177 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NFIBO00712 420 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MYL3P08590 195 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 IGFBP4P22692 258 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CPT1AP50416 773 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 OR6J1Q8NGC5 347 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SCLYQ96I15 445 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 WNT8AQ9H1J5 351 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 YBX2Q9Y2T7 364 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RAD50Q92878 1312 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 B4DLN1 442 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NKRFO15226 690 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 FGAP02671 866 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PFKMP08237 780 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CALML3P27482 149 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RBM25P49756 843 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MFAP1P55081 439 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PDE4DQ08499 809 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ADGRE1Q14246 886 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MTG1Q9BT17 334 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TRMT13Q9NUP7 481 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TNKSO95271 1327 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 WDR19Q8NEZ3 1342 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 GBF1Q92538 1859 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 A0A0D9SFI3 127 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 KPNA6O60684 536 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PDHBP11177 359 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CYP2C9P11712 490 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RABGGTBP53611 331 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 HAND2P61296 217 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CCDC85BQ15834 202 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 FAM47CQ5HY64 1035 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms