RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 COL25A1Q9BXS0 654 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-208ENST00000582629 GRIN2DO15399 1336 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 WDR19Q8NEZ3 1342 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 SNHG28P0DPA3 235 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 CYP2C18P33260 490 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 NT5C2P49902 561 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 ZNF365Q70YC5 407 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 TIFAQ96CG3 184 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 HIPK3Q9H422 1215 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
ITGB4-208ENST00000582629 IL23AQ9NPF7 189 aa17■□□□□ 0.31
ITGB4-208ENST00000582629 EYSQ5T1H1 3165 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 ACRP10323 421 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 SDSP20132 328 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 CALML3P27482 149 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 TMEM63BQ5T3F8 832 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 SLC30A10Q6XR72 485 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 ESR2Q92731 530 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 MPHOSPH6Q99547 160 aaKnown RBP16.99■□□□□ 0.31
ITGB4-208ENST00000582629 WDR11Q9BZH6 1224 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 MTIF3Q9H2K0 278 aaKnown RBP16.99■□□□□ 0.31
ITGB4-208ENST00000582629 ZNF576Q9H609 170 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
ITGB4-208ENST00000582629 NEDD4P46934 1319 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 RBM47A0AV96 593 aaKnown RBP16.98■□□□□ 0.31
ITGB4-208ENST00000582629 PSMC6P62333 389 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 HERVK_113Q902F9 699 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 PBX4Q9BYU1 374 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 OSBPL3Q9H4L5 887 aa16.98■□□□□ 0.31
ITGB4-208ENST00000582629 ZNF213O14771 459 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 B4GALT4O60513 344 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 CPT1AP50416 773 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 RPS6P62753 249 aaKnown RBP16.97■□□□□ 0.31
ITGB4-208ENST00000582629 PDE4DQ08499 809 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 CCDC178Q5BJE1 867 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
ITGB4-208ENST00000582629 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 DNERQ8NFT8 737 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 NOC4LQ9BVI4 516 aaKnown RBP16.97■□□□□ 0.31
ITGB4-208ENST00000582629 TRPV6Q9H1D0 765 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 GBF1Q92538 1859 aa16.97■□□□□ 0.31
ITGB4-208ENST00000582629 MYO9BQ13459 2157 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 GRXCR1A8MXD5 290 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 NKRFO15226 690 aaKnown RBP eCLIP16.96■□□□□ 0.31
ITGB4-208ENST00000582629 FGBP02675 491 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 EDNRBP24530 442 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 PBX2P40425 430 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 PURAQ00577 322 aaKnown RBP16.96■□□□□ 0.31
ITGB4-208ENST00000582629 RAB30Q15771 203 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 BRDTQ58F21 947 aaPredicted RBP16.96■□□□□ 0.31
ITGB4-208ENST00000582629 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
ITGB4-208ENST00000582629 DIAPH3Q9NSV4 1193 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 SCN10AQ9Y5Y9 1956 aa16.96■□□□□ 0.31
ITGB4-208ENST00000582629 RAD50Q92878 1312 aa16.96■□□□□ 0.3
ITGB4-208ENST00000582629 B4DLN1 442 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 HIP1O00291 1037 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 MYL3P08590 195 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 SUPT20HL2P0C7V6 817 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
ITGB4-208ENST00000582629 CCL23P55773 120 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 NUCB1Q02818 461 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 PPP2R5BQ15173 497 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
ITGB4-208ENST00000582629 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
ITGB4-208ENST00000582629 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 SCFD2Q8WU76 684 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 MTG1Q9BT17 334 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-208ENST00000582629 WNT8AQ9H1J5 351 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-208ENST00000582629 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 MYH6P13533 1939 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 VCANP13611 3396 aa16.95■□□□□ 0.3
ITGB4-208ENST00000582629 KDM4AO75164 1064 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 USH1GQ495M9 461 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 MAF1Q9H063 256 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
ITGB4-208ENST00000582629 CXXC1Q9P0U4 656 aaPredicted RBP16.94■□□□□ 0.3
ITGB4-208ENST00000582629 KPNA6O60684 536 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 IGHDP01880 384 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-208ENST00000582629 OTOP2Q7RTS6 562 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 ZSCAN10Q96SZ4 725 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-208ENST00000582629 GAS2L1Q99501 681 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-208ENST00000582629 DSCC1Q9BVC3 393 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 UBA5Q9GZZ9 404 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
ITGB4-208ENST00000582629 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms