RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 AAMPQ13685 434 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 CLEC4DQ8WXI8 215 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
CCDC57-214ENST00000582040 TTC14Q96N46 770 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 COL25A1Q9BXS0 654 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-214ENST00000582040 HIPK3Q9H422 1215 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-214ENST00000582040 Q9Y3F1 56 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 DUSP28Q4G0W2 176 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 RASIP1Q5U651 963 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 RNF207Q6ZRF8 634 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 ESR2Q92731 530 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
CCDC57-214ENST00000582040 IL23AQ9NPF7 189 aa16.9■□□□□ 0.3
CCDC57-214ENST00000582040 CDH23Q9H251 3354 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 EYSQ5T1H1 3165 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 GRXCR1A8MXD5 290 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 B4GALT4O60513 344 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 GRIN2CQ14957 1233 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
CCDC57-214ENST00000582040 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 TRPV6Q9H1D0 765 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
CCDC57-214ENST00000582040 ZNF213O14771 459 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 PBX2P40425 430 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 CCL23P55773 120 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 RPS6P62753 249 aaKnown RBP16.88■□□□□ 0.29
CCDC57-214ENST00000582040 USH1GQ495M9 461 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
CCDC57-214ENST00000582040 NOC4LQ9BVI4 516 aaKnown RBP16.88■□□□□ 0.29
CCDC57-214ENST00000582040 SEZ6LQ9BYH1 1024 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 WNT8AQ9H1J5 351 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 ZNF576Q9H609 170 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
CCDC57-214ENST00000582040 RBM47A0AV96 593 aaKnown RBP16.87■□□□□ 0.29
CCDC57-214ENST00000582040 KDM4AO75164 1064 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 IGHDP01880 384 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 MYL3P08590 195 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 NUCB1Q02818 461 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 PDE4DQ08499 809 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
CCDC57-214ENST00000582040 PNMA1Q8ND90 353 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
CCDC57-214ENST00000582040 EDNRBP24530 442 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 CPT1AP50416 773 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 PURAQ00577 322 aaKnown RBP16.86■□□□□ 0.29
CCDC57-214ENST00000582040 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 DNERQ8NFT8 737 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 HERVK_113Q902F9 699 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
CCDC57-214ENST00000582040 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 ALDH8A1Q9H2A2 487 aaPredicted RBP16.86■□□□□ 0.29
CCDC57-214ENST00000582040 MTIF3Q9H2K0 278 aaKnown RBP16.86■□□□□ 0.29
CCDC57-214ENST00000582040 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 CXXC1Q9P0U4 656 aaPredicted RBP16.86■□□□□ 0.29
CCDC57-214ENST00000582040 GBF1Q92538 1859 aa16.86■□□□□ 0.29
CCDC57-214ENST00000582040 B4E1Z4 1266 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 FGBP02675 491 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 CDC37Q16543 378 aaPredicted RBP16.85■□□□□ 0.29
CCDC57-214ENST00000582040 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 OTOP2Q7RTS6 562 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 COPS5Q92905 334 aa16.85■□□□□ 0.29
CCDC57-214ENST00000582040 TRMT13Q9NUP7 481 aaKnown RBP16.85■□□□□ 0.29
CCDC57-214ENST00000582040 SCN10AQ9Y5Y9 1956 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 HIP1O00291 1037 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 NKRFO15226 690 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCDC57-214ENST00000582040 CYP2C9P11712 490 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 NT5C2P49902 561 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 RAB30Q15771 203 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 USP38Q8NB14 1042 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 SCLYQ96I15 445 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 MTG1Q9BT17 334 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-214ENST00000582040 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-214ENST00000582040 TNKSO95271 1327 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 RAD50Q92878 1312 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 CHD9Q3L8U1 2897 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 PRUNE2Q8WUY3 3088 aa16.84■□□□□ 0.29
CCDC57-214ENST00000582040 ABCB11O95342 1321 aa16.83■□□□□ 0.28
CCDC57-214ENST00000582040 ARIH2O95376 493 aa16.83■□□□□ 0.28
CCDC57-214ENST00000582040 IMMTQ16891 758 aaKnown RBP16.83■□□□□ 0.28
CCDC57-214ENST00000582040 ASPRV1Q53RT3 343 aa16.83■□□□□ 0.28
CCDC57-214ENST00000582040 BRDTQ58F21 947 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms