RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PSRC1Q6PGN9 363 aaPredicted RBP12.5□□□□□ -0.41
RFFL-209ENST00000581265 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 FAM227BQ96M60 508 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 TTC14Q96N46 770 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 PURBQ96QR8 312 aaKnown RBP12.5□□□□□ -0.41
RFFL-209ENST00000581265 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 IL23AQ9NPF7 189 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
RFFL-209ENST00000581265 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
RFFL-209ENST00000581265 ZMYM6O95789 1325 aa12.5□□□□□ -0.41
RFFL-209ENST00000581265 MYO9BQ13459 2157 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 ACRP10323 421 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 PCP11498 1178 aaKnown RBP12.49□□□□□ -0.41
RFFL-209ENST00000581265 PTGS1P23219 599 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 DUSP28Q4G0W2 176 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
RFFL-209ENST00000581265 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 FBXO16Q8IX29 292 aaPredicted RBP12.49□□□□□ -0.41
RFFL-209ENST00000581265 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 PBX4Q9BYU1 374 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 HIPK3Q9H422 1215 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
RFFL-209ENST00000581265 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
RFFL-209ENST00000581265 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
RFFL-209ENST00000581265 GRXCR1A8MXD5 290 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 NFIBO00712 420 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 FGBP02675 491 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 PDHBP11177 359 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 PBX2P40425 430 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 NMIQ13287 307 aaPredicted RBP12.48□□□□□ -0.41
RFFL-209ENST00000581265 RAB30Q15771 203 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
RFFL-209ENST00000581265 CLEC4DQ8WXI8 215 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 NOC4LQ9BVI4 516 aaKnown RBP12.48□□□□□ -0.41
RFFL-209ENST00000581265 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 TRPV6Q9H1D0 765 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
RFFL-209ENST00000581265 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 FRMPD2Q68DX3 1309 aaPredicted RBP12.47□□□□□ -0.41
RFFL-209ENST00000581265 B4GALT4O60513 344 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 BMP1P13497 986 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 ALDH5A1P51649 535 aaPredicted RBP12.47□□□□□ -0.41
RFFL-209ENST00000581265 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 AAMPQ13685 434 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 ADGRE1Q14246 886 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 SLC28A3Q9HAS3 691 aa12.47□□□□□ -0.41
RFFL-209ENST00000581265 UMODL1Q5DID0 1318 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 CCDC171Q6TFL3 1326 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 NT5C2P49902 561 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 HAND2P61296 217 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 PSMC6P62333 389 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 PURAQ00577 322 aaKnown RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 RNF207Q6ZRF8 634 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 DNERQ8NFT8 737 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 MAF1Q9H063 256 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 MTIF3Q9H2K0 278 aaKnown RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
RFFL-209ENST00000581265 POLR3EQ9NVU0 708 aa12.46□□□□□ -0.41
RFFL-209ENST00000581265 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.421e-12■■■□□ 17.1
RFFL-209ENST00000581265 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 SDSP20132 328 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 EDNRBP24530 442 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 CALML3P27482 149 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 CPT1AP50416 773 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
RFFL-209ENST00000581265 CCL23P55773 120 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 TFF2Q03403 129 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 GPATCH4Q5T3I0 446 aaKnown RBP12.45□□□□□ -0.42
RFFL-209ENST00000581265 SLC30A10Q6XR72 485 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 ESR2Q92731 530 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 VWCEQ96DN2 955 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 MPHOSPH6Q99547 160 aaKnown RBP12.45□□□□□ -0.42
RFFL-209ENST00000581265 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 WNT8AQ9H1J5 351 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 NKX2-4Q9H2Z4 354 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
RFFL-209ENST00000581265 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 A6NJR5 290 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 B4DLN1 442 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 KPNA6O60684 536 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 KCNQ1P51787 676 aa12.44□□□□□ -0.42
RFFL-209ENST00000581265 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms