RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SPRED1Q7Z699 444 aa5.71□□□□□ -1.5
SMG8-205ENST00000580798 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
SMG8-205ENST00000580798 SSBP3Q9BWW4 388 aaPredicted RBP5.71□□□□□ -1.5
SMG8-205ENST00000580798 SHOXO15266 292 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 ACVRL1P37023 503 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 CYP2R1Q6VVX0 501 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 HS2ST1Q7LGA3 356 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 ZFPM1Q8IX07 1006 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 SMARCC2Q8TAQ2 1214 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 ADAMTS17Q8TE56 1095 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 GIPC2Q8TF65 315 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 DVL3Q92997 716 aaPredicted RBP5.7□□□□□ -1.5
SMG8-205ENST00000580798 BCL2L13Q9BXK5 485 aa5.7□□□□□ -1.5
SMG8-205ENST00000580798 H0Y8X5 98 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 NME1P15531 152 aaKnown RBP5.69□□□□□ -1.5
SMG8-205ENST00000580798 MCM4P33991 863 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 CORO7P57737 925 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 REXO1Q8N1G1 1221 aaKnown RBP5.69□□□□□ -1.5
SMG8-205ENST00000580798 CHST13Q8NET6 341 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 SH3RF3Q8TEJ3 882 aaPredicted RBP5.69□□□□□ -1.5
SMG8-205ENST00000580798 SRRTQ9BXP5 876 aaKnown RBP5.69□□□□□ -1.5
SMG8-205ENST00000580798 RXFP1Q9HBX9 757 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
SMG8-205ENST00000580798 MEIS3P2A8K0S8 358 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 CYR61O00622 381 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 GLI4P10075 376 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
SMG8-205ENST00000580798 CRIP3Q6Q6R5 217 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 C7orf61Q8IZ16 206 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 NLGN2Q8NFZ4 835 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 ZBTB8AQ96BR9 441 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 TSPAN17Q96FV3 270 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 SLITRK6Q9H5Y7 841 aa5.68□□□□□ -1.5
SMG8-205ENST00000580798 C9IYK1 514 aa5.67□□□□□ -1.5
SMG8-205ENST00000580798 RBM25P49756 843 aaKnown RBP5.67□□□□□ -1.5
SMG8-205ENST00000580798 ZNF165P49910 485 aa5.67□□□□□ -1.5
SMG8-205ENST00000580798 CPA5Q8WXQ8 436 aa5.67□□□□□ -1.5
SMG8-205ENST00000580798 NKD1Q969G9 470 aa5.67□□□□□ -1.5
SMG8-205ENST00000580798 SLC9A7Q96T83 725 aa5.67□□□□□ -1.5
SMG8-205ENST00000580798 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
SMG8-205ENST00000580798 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
SMG8-205ENST00000580798 CDSNQ15517 529 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 LRRFIP1Q32MZ4 808 aaKnown RBP5.66□□□□□ -1.5
SMG8-205ENST00000580798 RGL3Q3MIN7 710 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 PTCHD1Q96NR3 888 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 FCRL3Q96P31 734 aaPredicted RBP5.66□□□□□ -1.5
SMG8-205ENST00000580798 NT5C1AQ9BXI3 368 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 INVSQ9Y283 1065 aa5.66□□□□□ -1.5
SMG8-205ENST00000580798 CLSTN1O94985 981 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 L1CAMP32004 1257 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 CRB2Q5IJ48 1285 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 TMCO4Q5TGY1 634 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 LIMS2Q7Z4I7 341 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 KIAA0825Q8IV33 1275 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 SLITRK4Q8IW52 837 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 CCDC144CPQ8IYA2 1237 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 LINC00482Q8N8I6 264 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 PSMD1Q99460 953 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 SUCOQ9UBS9 1254 aaKnown RBP5.65□□□□□ -1.5
SMG8-205ENST00000580798 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 TSC22D4Q9Y3Q8 395 aa5.65□□□□□ -1.5
SMG8-205ENST00000580798 E9PSI1 815 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 FZD7O75084 574 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 TBC1D8O95759 1140 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 ACRP10323 421 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
SMG8-205ENST00000580798 ZNF445P59923 1031 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 LGI4Q8N135 537 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 BRF1Q92994 677 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 PKNOX2Q96KN3 472 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 SPON2Q9BUD6 331 aa5.64□□□□□ -1.51
SMG8-205ENST00000580798 SMARCA5O60264 1052 aaPredicted RBP5.63□□□□□ -1.51
SMG8-205ENST00000580798 IFNGR1P15260 489 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 KIAA2012Q0VF49 1180 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 LDLRAD1Q5T700 205 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 DCAF15Q66K64 600 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 GLB1LQ6UWU2 654 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 KISS1RQ969F8 398 aaPredicted RBP5.63□□□□□ -1.51
SMG8-205ENST00000580798 GORASP1Q9BQQ3 440 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 ZNF747Q9BV97 191 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 PCED1AQ9H1Q7 454 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 ZNRF3Q9ULT6 936 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 ZNF536O15090 1300 aa5.63□□□□□ -1.51
SMG8-205ENST00000580798 ARID4BQ4LE39 1312 aaPredicted RBP5.63□□□□□ -1.51
SMG8-205ENST00000580798 RPL13P26373 211 aaKnown RBP5.62□□□□□ -1.51
SMG8-205ENST00000580798 SLC9A5Q14940 896 aa5.62□□□□□ -1.51
SMG8-205ENST00000580798 NOL9Q5SY16 702 aaKnown RBP5.62□□□□□ -1.51
SMG8-205ENST00000580798 TDRD10Q5VZ19 366 aaKnown RBP5.62□□□□□ -1.51
SMG8-205ENST00000580798 CABP7Q86V35 215 aa5.62□□□□□ -1.51
SMG8-205ENST00000580798 TMEM87AQ8NBN3 555 aa5.62□□□□□ -1.51
SMG8-205ENST00000580798 NETO2Q8NC67 525 aa5.62□□□□□ -1.51
SMG8-205ENST00000580798 RGS22Q8NE09 1264 aa5.62□□□□□ -1.51
SMG8-205ENST00000580798 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms