RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 RFX7Q2KHR2 1363 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 M0R2C6 588 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 MCAMP43121 646 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 RCAN1P53805 252 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 TNNC1P63316 161 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 SLC16A2P36021 539 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 NBPF11Q86T75 865 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 RNF146Q9NTX7 359 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 MTRF1LQ9UGC7 380 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 ARMCX3Q9UH62 379 aaPredicted RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 E7EVH7 732 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ARL1P40616 181 aaPredicted RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 STAT3P40763 770 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 RASA3Q14644 834 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 FAM26FQ5R3K3 315 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 LBHD1Q9BQE6 289 aaPredicted RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 ESPNB1AK53 854 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 AKR1B15C9JRZ8 316 aaPredicted RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 PRKAB2O43741 272 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 IFNAR1P17181 557 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 RAD51AP2Q09MP3 1159 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 MAIP1Q8WWC4 291 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 POMGNT1Q8WZA1 660 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 IFT122Q9HBG6 1241 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 TRMT1Q9NXH9 659 aaKnown RBP11.26□□□□□ -0.61
MSI2-209ENST00000579483 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
MSI2-209ENST00000579483 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 ERCC5P28715 1186 aaPredicted RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 CALCOCO2Q13137 446 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 SEPT2Q15019 361 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 FAM84BQ96KN1 310 aaPredicted RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 ACCSQ96QU6 501 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 KMT5AQ9NQR1 393 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 TBC1D7Q9P0N9 293 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 KDM6AO15550 1401 aaPredicted RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 MST1RQ04912 1400 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CTAGE15A4D2H0 777 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GOLGA6BA6NDN3 693 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CTAGE8P0CG41 777 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 CTAGE6Q86UF2 777 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CTAGE4Q8IX94 777 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 ZBTB5O15062 677 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 MYL1P05976 194 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 EIF2AK2P19525 551 aaKnown RBP11.25□□□□□ -0.61
MSI2-209ENST00000579483 CACNB3P54284 484 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 KRT76Q01546 638 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 C7orf31Q8N865 590 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CTAGE9A4FU28 777 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 OATP04181 439 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CYP2J2P51589 502 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 COG2Q14746 738 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GSDMBQ8TAX9 411 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
MSI2-209ENST00000579483 SKILP12757 684 aa11.24□□□□□ -0.61
MSI2-209ENST00000579483 ALX1Q15699 326 aa11.24□□□□□ -0.61
MSI2-209ENST00000579483 C9orf131Q5VYM1 1079 aa11.24□□□□□ -0.61
MSI2-209ENST00000579483 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
MSI2-209ENST00000579483 SH2B2O14492 632 aaPredicted RBP11.24□□□□□ -0.61
MSI2-209ENST00000579483 SORBS3O60504 671 aa11.24□□□□□ -0.61
MSI2-209ENST00000579483 SLC25A27O95847 323 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms