RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PRPF3O43395 683 aaKnown RBP9.27□□□□□ -0.92
COPS3-215ENST00000578317 DDIT3P35638 169 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 KIAA1755Q5JYT7 1200 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 SAPCD2Q86UD0 394 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.92
COPS3-215ENST00000578317 RAB11FIP4Q86YS3 637 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 CCDC144CPQ8IYA2 1237 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 CHURC1Q8WUH1 139 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 MTMR8Q96EF0 704 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 FEZ1Q99689 392 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 ELP3Q9H9T3 547 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.27□□□□□ -0.92
COPS3-215ENST00000578317 SMC3Q9UQE7 1217 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 KIF3AQ9Y496 699 aa9.27□□□□□ -0.92
COPS3-215ENST00000578317 STK36Q9NRP7 1315 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 A0A0G2JLL6 359 aaPredicted RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 TRIM75PA6NK02 468 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 CYTH3O43739 400 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 FDPSP14324 419 aaKnown RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 SSRP1Q08945 709 aaKnown RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 PRRT2Q7Z6L0 340 aaPredicted RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 OPTNQ96CV9 577 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 MAP10Q9P2G4 905 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
COPS3-215ENST00000578317 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
COPS3-215ENST00000578317 POLR2AP24928 1970 aaKnown RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 PTPDC1A2A3K4 754 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 JAK2O60674 1132 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 PLEKHA8P1O95397 391 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 DEXIO95424 95 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 GOLGA8HP0CJ92 632 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 ZBTB48P10074 688 aaPredicted RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 PDCP20941 246 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 HOXA7P31268 230 aaPredicted RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 HUNKP57058 714 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 SNAPC2Q13487 334 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 SLC35G1Q2M3R5 365 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 FAM160B2Q86V87 743 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 WASF1Q92558 559 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 TMOD4Q9NZQ9 345 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 ORC3Q9UBD5 711 aaPredicted RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 V9GY48 417 aaPredicted RBP9.26□□□□□ -0.93
COPS3-215ENST00000578317 CEP350Q5VT06 3117 aa9.26□□□□□ -0.93
COPS3-215ENST00000578317 TMEM232C9JQI7 657 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 PIK3CDO00329 1044 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 S1PR4O95977 384 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 VCAM1P19320 739 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 GJB2P29033 226 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 CTHP32929 405 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 STAT2P52630 851 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 HMGCS2P54868 508 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
COPS3-215ENST00000578317 ELOAQ14241 798 aaKnown RBP9.25□□□□□ -0.93
COPS3-215ENST00000578317 PKN1Q16512 942 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 FAM83BQ5T0W9 1011 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 SPRYD7Q5W111 196 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 CATSPERGQ6ZRH7 1159 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 ADGRF4Q8IZF3 695 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 SPICE1Q8N0Z3 855 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 CMTR1Q8N1G2 835 aaKnown RBP9.25□□□□□ -0.93
COPS3-215ENST00000578317 PRPF38AQ8NAV1 312 aaKnown RBP9.25□□□□□ -0.93
COPS3-215ENST00000578317 PHKBQ93100 1093 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 WNK4Q96J92 1243 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 SLC26A6Q9BXS9 759 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 SLC6A16Q9GZN6 736 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 JMJD4Q9H9V9 463 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 HOXC10Q9NYD6 342 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 MTMR7Q9Y216 660 aa9.25□□□□□ -0.93
COPS3-215ENST00000578317 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 GTF2A2P52657 109 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 INHBEP58166 350 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 KCNC4Q03721 635 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 MOGSQ13724 837 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 COG2Q14746 738 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 ZYXQ15942 572 aaKnown RBP9.24□□□□□ -0.93
COPS3-215ENST00000578317 PFKFB3Q16875 520 aaPredicted RBP9.24□□□□□ -0.93
COPS3-215ENST00000578317 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 SYDE2Q5VT97 1194 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 RASGRP2Q7LDG7 609 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 FAM184AQ8NB25 1140 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
COPS3-215ENST00000578317 NUP88Q99567 741 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms